selenodb.org

SelenoDB: selenoproteins database

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Please, query the SelenoDB 2.0 database for:. Cysteine-containing homologs or selenium machinery genes. Please, access SelenoDB 1.0 here. Anole lizard (Anolis carolinensis). Softshell turtle (Pelodiscus sinensis). Guinea Pig (Cavia porcellus). Kangaroo rat (Dipodomys ordii). Lesser hedgehog (Echinops telfairi). Mouse Lemur (Microcebus murinus).

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SelenoDB: selenoproteins database | selenodb.org Reviews

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Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Please, query the SelenoDB 2.0 database for:. Cysteine-containing homologs or selenium machinery genes. Please, access SelenoDB 1.0 here. Anole lizard (Anolis carolinensis). Softshell turtle (Pelodiscus sinensis). Guinea Pig (Cavia porcellus). Kangaroo rat (Dipodomys ordii). Lesser hedgehog (Echinops telfairi). Mouse Lemur (Microcebus murinus).

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2 release

3 help database help

4 chart

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6 transcript

7 promoter

8 protein

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SelenoDB: selenoproteins database | selenodb.org Reviews

https://selenodb.org

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Please, query the SelenoDB 2.0 database for:. Cysteine-containing homologs or selenium machinery genes. Please, access SelenoDB 1.0 here. Anole lizard (Anolis carolinensis). Softshell turtle (Pelodiscus sinensis). Guinea Pig (Cavia porcellus). Kangaroo rat (Dipodomys ordii). Lesser hedgehog (Echinops telfairi). Mouse Lemur (Microcebus murinus).

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www1.selenodb.org

SelenoDB: selenoproteins database

Is a joint effort between experimental and computational labs to create, mantain and update a database of eukaryotic selenoprotein genes, proteins, SECIS elements and related molecules. Selenoproteins are routinely mispredicted by automatic annotation systems and, therefore, misannotated in most genomic databases. We aim to provide correct annotations for the growing number of known selenoprotein genes. Computational tools and manually curated. Predictions. Computational approaches include ab initio.

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selenodb.org

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SelenoDB: selenoproteins database

http://www.selenodb.org/leipzig/cite

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Please, if you find Seleno. Useful for your research cite:. Romagné F, Santesmasses D, White L, Sarangi GK, Mariotti M, Hübler R, Weihmann A, Parra G, Gladyshev VN, Guig&#243 R and Castellano S. SelenoDB 2.0: annotation of selenoprotein genes in animals and their genetic diversity in humans. Castellano S, Gladyshev VN, Guigó R and Berry MJ. Comput...

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SelenoDB: selenoproteins database

http://www.selenodb.org/leipzig/documentation

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. BASH database population script. Database web interface software. Web interface design (contact us). Home SelenoDB shiny home. Cite S. Castellano, V.N. Gladyshev, R. Guigó and M.J. Berry. SelenoDB: a database of selenoprotein genes, proteins and SECIS elements. Disclaimer Please, read the SelenoDB software and data disclaimer.

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SelenoDB: selenoproteins database

http://www.selenodb.org/leipzig/public

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Is a community project:. All material (software and data) in the database, whether submitted to or created by us, is released under an open access license. That allows unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Home SelenoDB shiny home. Faq Frequently Asked Questions.

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SelenoDB: selenoproteins database

http://www.selenodb.org/leipzig/help

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Querying the database annotations. Displaying the database annotations. Downloading the database annotations. Home SelenoDB shiny home. Cite S. Castellano, V.N. Gladyshev, R. Guigó and M.J. Berry. SelenoDB: a database of selenoprotein genes, proteins and SECIS elements. Disclaimer Please, read the SelenoDB software and data disclaimer.

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SelenoDB: selenoproteins database

http://www.selenodb.org/leipzig/download

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. GTF ( tar.gz. Candidate genes and pseudogenes (unfiltered): VCF ( tar.gz. Candidate genes (filtered): VCF ( tar.gz. Pseudogenes (filtered): VCF ( tar.gz. SQL dump ( gz. Home SelenoDB shiny home. Cite S. Castellano, V.N. Gladyshev, R. Guigó and M.J. Berry. SelenoDB: a database of selenoprotein genes, proteins and SECIS elements.

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Recode2 :: Database of translational recoding events

http://recode.ucc.ie/resources

Recode v. 2.0. Database of translational recoding events. Recoding resources on the Net. A program for automatic annotation of bacterial release factors. The main feature of ARFA is its ability to predict and annotate 1 ribosomal frameshifting that takes place during expression of release factor 2 genes. [ link. A database of programmed ribosomal frameshifting events. [ link. A program for predicting sites of ribosomal frameshifting containing simple RNA pseudoknots. [ link.

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SelenoDB: selenoproteins database

Home SelenoDB shiny home. Statistics Gene annotation statistics. Download Download data and software. Documentation Database and gene annotation documentation. Please, query the SelenoDB 2.0 database for:. Cysteine-containing homologs or selenium machinery genes. Please, access SelenoDB 1.0 here. Anole lizard (Anolis carolinensis). Softshell turtle (Pelodiscus sinensis). Guinea Pig (Cavia porcellus). Kangaroo rat (Dipodomys ordii). Lesser hedgehog (Echinops telfairi). Mouse Lemur (Microcebus murinus).

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