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SNiPA - a single nucleotide polymorphisms annotator and browser

Variant clipboard ( 0. SNiPA - a tool for annotating and browsing genetic variants. Welcome to SN i. SNiPA offers both functional annotations and linkage disequilibrium information for bi-allelic genomic variants (SNPs and SNVs). SNiPA combines LD data based on the 1000 Genomes Project. With various annotation layers, such as gene annotations, phenotypic trait associations, and expression-/metabolic quantitative trait loci. See the documentation. Explore the functional annotations of variants. Bioinforma...

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SNiPA - a single nucleotide polymorphisms annotator and browser | snipa.helmholtz-muenchen.de Reviews
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Variant clipboard ( 0. SNiPA - a tool for annotating and browsing genetic variants. Welcome to SN i. SNiPA offers both functional annotations and linkage disequilibrium information for bi-allelic genomic variants (SNPs and SNVs). SNiPA combines LD data based on the 1000 Genomes Project. With various annotation layers, such as gene annotations, phenotypic trait associations, and expression-/metabolic quantitative trait loci. See the documentation. Explore the functional annotations of variants. Bioinforma...
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1 browse
2 variant browser
3 association maps
4 annotation
5 variant annotation
6 block annotation
7 plots
8 regional association plot
9 linkage disequilibrium plot
10 linkage disequilibrium
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SNiPA - a single nucleotide polymorphisms annotator and browser | snipa.helmholtz-muenchen.de Reviews

https://snipa.helmholtz-muenchen.de

Variant clipboard ( 0. SNiPA - a tool for annotating and browsing genetic variants. Welcome to SN i. SNiPA offers both functional annotations and linkage disequilibrium information for bi-allelic genomic variants (SNPs and SNVs). SNiPA combines LD data based on the 1000 Genomes Project. With various annotation layers, such as gene annotations, phenotypic trait associations, and expression-/metabolic quantitative trait loci. See the documentation. Explore the functional annotations of variants. Bioinforma...

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SNiPA - a single nucleotide polymorphisms annotator and browser

http://snipa.helmholtz-muenchen.de/snipa/index.php

Variant clipboard ( 0. SNiPA - a tool for annotating and browsing genetic variants. Welcome to SN i. SNiPA offers both functional annotations and linkage disequilibrium information for bi-allelic genomic variants (SNPs and SNVs). SNiPA combines LD data based on the 1000 Genomes Project. With various annotation layers, such as gene annotations, phenotypic trait associations, and expression-/metabolic quantitative trait loci. See the documentation. Explore the functional annotations of variants. Bioinforma...

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SNiPA - a single nucleotide polymorphisms annotator and browser

http://snipa.helmholtz-muenchen.de/snipa/index.php?task=variant_browser

Variant clipboard ( 0. The variant browser visualizes the functional annotation of variants within a 200 kb window. The position on the y-axis represents the estimated function of a variant, ranging from unknown (bottom) to direct transcript effects (top). Use the karyogram to quickly navigate to a chromosomal region. Blue spikes in the karyogram indicate regions containing a high proportion of functional variants. Genome Assembly, Variant Set, Population, and Genome Annotation. Start processing this job.

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SNiPA - a single nucleotide polymorphisms annotator and browser

Variant clipboard ( 0. SNiPA - a tool for annotating and browsing genetic variants. Welcome to SN i. SNiPA offers both functional annotations and linkage disequilibrium information for bi-allelic genomic variants (SNPs and SNVs). SNiPA combines LD data based on the 1000 Genomes Project. With various annotation layers, such as gene annotations, phenotypic trait associations, and expression-/metabolic quantitative trait loci. See the documentation. Explore the functional annotations of variants. Bioinforma...

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