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Stephens Lab

Matthew Stephens Lab at University of Chicago

http://stephenslab.uchicago.edu/

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Stephens Lab | stephenslab.uchicago.edu Reviews
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Matthew Stephens Lab at University of Chicago
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1 matthew stephens
2 stephens
3 uchicago
4 statistics
5 human genetics
6 mcmc
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8 statistical genetics
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matthew stephens lab,department of statistics,university of chicago,research,people,publications,courses,software,stephens lab overview,research projects
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Stephens Lab | stephenslab.uchicago.edu Reviews

https://stephenslab.uchicago.edu

Matthew Stephens Lab at University of Chicago

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1

Stephens Lab

http://stephenslab.uchicago.edu/index.html

Department of Human Genetics. My lab is located in the department of Human Genetics, in recently-renovated computational space shared with the labs of John Novembre. Our groups interact with one another continuously, with students and postdocs from different groups sharing offices. We think this is a great place to come and do research, and are very proud of what we have going on. If you think you might be interested in joining us, send me an email. To enquire about opportunities.

2

Stephens Lab

http://stephenslab.uchicago.edu/publications.html

Department of Human Genetics. K Dey, C Hsiao, and M Stephens. Clustering RNA-seq expression data using grade of membership model. Http:/ biorxiv.org/content/early/2016/05/03/051631. R package - devel. R package - release. M Lu and M Stephens. Variance adaptive shrinkage (vash): Flexible empirical Bayes estimation of variances. Http:/ biorxiv.org/content/early/2016/04/13/048660. Software. Http:/ biorxiv.org/content/early/2016/03/04/042457. Software. M Stephens. False discovery rates: A new deal. A Raj, H ...

3

Stephens Lab

http://stephenslab.uchicago.edu/courses.html

Department of Human Genetics. Spring 2009, Mathematical Statistics II. Fall 2008, Statistical Methods for Gene Networks. Spring 2008, Bayesian Data Analysis. Original CSS template design by Andreas Viklund.

4

Stephens Lab

http://stephenslab.uchicago.edu/software.html

Department of Human Genetics. BIMBAM: software for Bayesian IMputation-Based Association Mapping. BLIMP: software for Best Linear IMPutation. BRIdGE: Bayesian Regression for Identifying Gene-Environment interactions. EQtlBma: software to detect eQTLs by Bayesian Model Averaging. FastPHASE: software for haplotype reconstruction, and estimating missing genotypes from population data. GEMMA: Genome-wide Efficient Mixed Model Association. SCAT: Smoothed and Continuous AssignmenTs. SFA: Sparse Factor Analysis.

5

Stephens Lab

http://stephenslab.uchicago.edu/people.html

Department of Human Genetics. Kushal K Dey, Graduate Student (2014-present). Joyce Hsiao, Postdoc (2015-present). Mengyin Lu, Graduate Student (2014-present). Lei Sun, Graduate Student (2014-present). Sarah Urbut, Graduate Student (2013-present). Wei Wang, Graduate Student (2014-present). Zhengrong (Tom) Xing, Graduate Student (2013-present). Siming Zhao, Postdoc (2015-present). Xiang Zhu, Graduate Student (2014-present). Mathew Barber, Postdoc (2006-2010), Statistical Geneticist at Ancestry.com. Postdoc...

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LINKS TO THIS WEBSITE

przeworski.c2b2.columbia.edu przeworski.c2b2.columbia.edu

Affiliates | Przeworski lab

http://przeworski.c2b2.columbia.edu/index.php/affiliates

Data & Code. Journal Club & Lab Meetings.

beehive.cs.princeton.edu beehive.cs.princeton.edu

People |

http://beehive.cs.princeton.edu/people

Events & calendar. Barbara E Engelhardt PhD. Assistant Professor, Department of Computer Science and Center for Statistics and Machine Learning (2014-present). Derek Aguiar, PhD. Postdoctoral Fellow, Princeton University (Sept 2014-present). Derek completed his PhD in Brown University’s Computer Science Department with Sorin Istrail in 2014. His current work focuses on Bayesian nonparametric statistical models for phasing, imputation, and other large-scale genomics data problems. Mark Carty, PhD. Roberta...

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Uncategorized | jnpopgen

https://jnpopgen.org/category/uncategorized

The Novembre Lab website. Lab programmer Joe Marcus spent three months of the summer in the lab of our collaborator Francesco Cucca in Cagliari, Sardinia as part of our work in the SardiNIA/Progenia project. The lab was awarded one of a new BD2K targeted software development awards. Based on our research proposal “Tools for Visualization of Geographic Structure in Population Genomic Data” (6/15). I authored a News and Views article “Human evolution: ancient DNA steps into the language debate”. Darren Kes...

jnpopgen.org jnpopgen.org

Lab News: 2015 | jnpopgen

https://jnpopgen.org/2015/01/05/lab-news-2015

The Novembre Lab website. As we start the New Year, I’m happy to share several updates from the lab:. We have had the addition of two new outstanding postdoctoral fellows:. Mark Reppell, a PhD graduate of the Department of Biostatistics at the University of Michigan under Sebastian Zollner and Mike Boehnke. Mark brings to the lab substantial expertise on coalescent models of rapidly growing populations. Congratulations to them on all accounts! As a group we all attended the ASHG meeting. Left us in the l...

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Zhou Lab

http://www.xzlab.org/team.html

Xiang Zhou is an Assistant Professor in the Department of Biostatistics. At the University of Michigan. Before joining UM, he was a William H. Kruskal Instructor in the Department of Statistics. At the University of Chicago. He received his postdoc training in Matthew Stephens lab. In the Department of Human Genetics. And Department of Statistics. At the University of Chicago. Where he also worked closely with people in Yoav Gilad lab. He obtained his MS and PhD degrees at Duke University. At the Univers...

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PEOPLE – Heejung Shim Lab

https://heejungshim.org/people

We seek highly motivated students to join our group. We are based in the Department of Statistics. At the Purdue University. Please feel free to contact Heejung Shim. If you are interested in joining us or having a rotation. The Great Ocean Road, 2014. I am an Assistant Professor in the Department of Statistics. At the Purdue University. I completed my BS in Mathematics (with a double major in Computer Science and Engineering) from the POSTECH. Advised by Dr. Bret Larget. I received a B.S. in mat...I lik...

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Orange County Business Attorneys - Stephens & Kray

5000 Birch Street, Suite 410, Newport Beach, CA 92660. Business and Estate Planning Attorneys. Providing exceptional legal expertise to our clients. Orange County Business Attorneys Stephens and Kray have acquired decades of expertise to provide clients with essential legal advice which will enable them to confidently make critical business and financial decisions. Respected by our Peers. Orange County Business Attorneys Serving the Community for over Three Decades. September 6, 2011. November 18, 2009.

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STEPHEN SKURNICK

THE ORIGINAL RETRO BRAND. LEVI STRAUSS AND CO.

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Matthew Stephens lab at University of Chicago

Please see our lab webpage here. Or our software projects on github here.

stephenslab.uchicago.edu stephenslab.uchicago.edu

Stephens Lab

Department of Human Genetics. My lab is located in the department of Human Genetics, in recently-renovated computational space shared with the lab of John Novembre. Our groups interact with one another continuously, with students and postdocs from different groups sharing offices. We think this is a great place to come and do research, and are very proud of what we have going on. If you think you might be interested in joining us, send me an email. To enquire about opportunities.

stephenslab.wordpress.com stephenslab.wordpress.com

Stephens Lab | Cell Biology Laboratories, School of Biochemistry, University of Bristol

Cell Biology Laboratories, School of Biochemistry, University of Bristol. Stephens Lab – Mechanistic Cell Biology. Methods in Cell Biology: Golgi Function. A video of our work. Stephens Lab – Mechanistic Cell Biology. Our work addresses three overlapping areas: secretory pathway function, membrane-microtubule dynamics, and formation and function or primary cilia. We are part of the School of Biochemistry. Central to the success of our projects is the Wolfson Bioimaging Facility. Follow me on Twitter.

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Friends

Will my humans care for me with the same level of commitment when I have hip dysplasia? Of course they will. Look at this face. What’s not to love? Genetic disorders aside, I dream of the day the humans reward me for my excellence by presenting me with the coveted red, white and blue Best in Show award. Why I'm the Best Dog Ever. I’m a purebred, registered stud with a balanced gait and glistening champagne coat. My fragrant post-bath aroma makes humans rethink their definitions of wet-dog smell.

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Stephen's Labor of Love | Professional Cleaning & Building Maintenance Services

Stephen's Labor of Love. Professional Cleaning and Building Maintenance Services. Skip to primary content. Skip to secondary content. Discounts & Specials. May 9, 2013. Welcome to Stephen’s Labor of Love Professional Cleaning Services. We have been providing cleaning services. On an as-needed basis or cleaning contracts) for over 10 years! We also provide building maintenance. For our clients if requested! Introductory offer for new customers. 50% off our first visit. House Cleaning or Office Cleaning.

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Stephens Labs

System Capacity and Spectral Efficiency. Welcome to Stephens Labs! As an R&D and rapid-prototyping company, we work with clients to help define systems and deliverables, and provide end-to-end development. In particular, we specialize in:. Customized navigation, geolocation, and RTLS solutions. Telecommunication systems design, analysis, and simulation. Definition of complex algorithms, their analysis and software embodiment. These solutions are developed as part of a full system design process:. Systems...