swisssidechain.ch

SwissSidechain - A database of non-natural sidechains

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain is a structural and molecular mechanics database of hundreds of non-natural amino-acid sidechains that can be used to study in silico. Their insertion into natural peptides or proteins. This website is provided and maintained by the Molecular modeling group.

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SwissSidechain - A database of non-natural sidechains | swisssidechain.ch Reviews

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In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain is a structural and molecular mechanics database of hundreds of non-natural amino-acid sidechains that can be used to study in silico. Their insertion into natural peptides or proteins. This website is provided and maintained by the Molecular modeling group.

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SwissSidechain - A database of non-natural sidechains | swisssidechain.ch Reviews

https://swisssidechain.ch

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain is a structural and molecular mechanics database of hundreds of non-natural amino-acid sidechains that can be used to study in silico. Their insertion into natural peptides or proteins. This website is provided and maintained by the Molecular modeling group.

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swisssidechain.ch

1

SwissSidechain - A database of non-natural sidechains

http://www.swisssidechain.ch/visualization/chimera.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - UCSF Chimera Module. This module enables users to mutate any residue of a PDB structure into one of the non-natural L- or D-sidechains of the SwissSidechain database. If you do not have UCSF Chimera, it can be obtained here. Installation (Chimera 1.5 ).

2

SwissSidechain - A database of non-natural sidechains

http://www.swisssidechain.ch/visualization/pymol.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - PyMOL Plugin. This plugin enables you to mutate any residue of a PDB structure into one of the non-natural L- or D-sidechains of the SwissSidechain database. If you do not have PyMOL, it can be obtained here. In a directory of your choice. Copy PySwissSidech...

3

SwissSidechain - A database of non-natural sidechains

http://www.swisssidechain.ch/D_residues.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - D-amino acids. Here, we provide all data to work with both natural and non-natural D-amino acids. All D-amino acids can be accessed from this page. By selecting the corresponding L-form. We note that depending on the backbone dihedral angles (&#966 and &#968...

4

SwissSidechain - A database of non-natural sidechains

http://www.swisssidechain.ch/FAQ.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. What is an amino acid? What is a sidechain? What are non-natural sidechains? What is the difference between L and D amino acids? How were the rotamer libraries generated in SwissSidechain? What kind of data can I find in the SwissSidechain database? Where can I obtain PyMOL?

5

SwissSidechain - A database of non-natural sidechains

http://www.swisssidechain.ch/browse.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. Swiss Institute of Bioinformatics.

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ns300183.ovh.net

SwissSidechain - A database of non-natural sidechains

http://ns300183.ovh.net/FAQ.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. What is an amino acid? What is a sidechain? What are non-natural sidechains? What is the difference between L and D amino acids? How were the rotamer libraries generated in SwissSidechain? What kind of data can I find in the SwissSidechain database? Where can I obtain PyMOL?

ns300183.ovh.net

SwissSidechain - A database of non-natural sidechains

http://ns300183.ovh.net/visualization/chimera.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - UCSF Chimera Module. This module enables users to mutate any residue of a PDB structure into one of the non-natural L- or D-sidechains of the SwissSidechain database. If you do not have UCSF Chimera, it can be obtained here. Installation (Chimera 1.5 ).

swissdock.ch

SwissDock - The online docking web server of the Swiss Institute of Bioinformatics - Feedback

http://swissdock.ch/pages/feedback

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. Please check out the the forum. In case you need assistance. For more information or feedback, please fill out the form below and send it to us. This server is free for academic use. A CHARMm license is required for users from private companies.

ns300183.ovh.net

SwissSidechain - A database of non-natural sidechains

http://ns300183.ovh.net/MD.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - Molecular Dynamics. You can find here topologies and parameters for molecular mechanics simulations with non-natural sidechains in GROMACS and CHARMM. Swiss Institute of Bioinformatics.

swisssimilarity.ch

SwissSimilarity

http://swisssimilarity.ch/help.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. Swiss Institute of Bioinformatics.

ns300183.ovh.net

SwissSidechain - A database of non-natural sidechains

http://ns300183.ovh.net/visualization.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain - Visualization Plugins. Swiss Institute of Bioinformatics.

swisstargetprediction.ch

SwissTargetPrediction

http://www.swisstargetprediction.ch/download.php

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. Download datasets used in SwissTargetPrediction. Validation dataset used in Gfeller et al., NAR 2014. List of homology relationships. Full list of interactions. Used to validate the homology-based predictions. Swiss Institute of Bioinformatics.

click2drug.org

Click2Drug - Encyclopedia - Chemical compounds - Most frequent scaffolds in FDA approved drugs

http://www.click2drug.org/encyclopedia/chemistry/fda-based-scaffolds.html

Swiss Institute of Bioinformatics. Frequent rings in FDA. Frequent scaffolds in FDA. Binding Free Energy Estimation. Oxygen, nitrogen-based heterocyles. Oxygen, sulfur-based heterocyles. Nitrogen, sulfur-based heterocyles. Frequent rings in FDA. Frequent scaffolds in FDA. Most frequent scaffolds in FDA approved drugs. Chemical drawings were obtained using Molconvert. Swiss Institute of Bioinformatics.

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SwissSidechain - A database of non-natural sidechains

In order to avoid security-related warning messages when switching to secured connection, you may want either to:. Confirm the exception on the next page, or. Import our CA key. In your web browser. Swiss Institute of Bioinformatics. SwissSidechain is a structural and molecular mechanics database of hundreds of non-natural amino-acid sidechains that can be used to study in silico. Their insertion into natural peptides or proteins. This website is provided and maintained by the Molecular modeling group.

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