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Http:/ tandem.bu.edu. Laboratory for Biocomputing and Informatics. Our laboratory research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Our goal is to deliver tools that are effective, efficient and easy to use. We have a number of ongoing collaborations. Please visit our research page for details on our most recent projects. New Vntrseek 1.05 version. Is now available for download. New TRF 4.07b version.

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Http:/ tandem.bu.edu. Laboratory for Biocomputing and Informatics. Our laboratory research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Our goal is to deliver tools that are effective, efficient and easy to use. We have a number of ongoing collaborations. Please visit our research page for details on our most recent projects. New Vntrseek 1.05 version. Is now available for download. New TRF 4.07b version.

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https://tandem.bu.edu

Http:/ tandem.bu.edu. Laboratory for Biocomputing and Informatics. Our laboratory research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Our goal is to deliver tools that are effective, efficient and easy to use. We have a number of ongoing collaborations. Please visit our research page for details on our most recent projects. New Vntrseek 1.05 version. Is now available for download. New TRF 4.07b version.

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tandem.bu.edu

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HOME

http://tandem.bu.edu/home.html

Http:/ tandem.bu.edu. Laboratory for Biocomputing and Informatics. Our laboratory research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Our goal is to deliver tools that are effective, efficient and easy to use. We have a number of ongoing collaborations. Please visit our research page for details on our most recent projects. New Vntrseek 1.05 version. Is now available for download. New TRF 4.07b version.

2

RESOURCES

http://tandem.bu.edu/resources.html

Http:/ tandem.bu.edu. National Center for Biotechnology Information (NCBI). Wwwncbi.nlm.nih.gov. European Molecular Biology Laboratory (EMBL). European Bioinformatics Institute (EBI). Tandem repeats database (France). Www-genome.wi.mit.edu/cgi-bin/primer/primer3 www.cgi. Http:/ www.sanger.ac.uk/Projects/C elegans/WORMBASE/GFF files.shtml. Yeast Genome at Standford. Http:/ www.yeastgenome.org. UCSC Golden Path human genome browser. Http:/ genome.ucsc.edu/. New Vntrseek 1.05 version.

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NEWS

http://tandem.bu.edu/news.html

Http:/ tandem.bu.edu. Vntrseek version 1.05 is now available for download here. New TRF version 4.07b is now available for download here. IRF commandline version is now available for download here. TRDB version 2.2 has some important features regarding downloads and reports, please check the about pages for more information regarding this release. Denise Mak presented the following paper at the APBC 2007 conference in Hon Kong:. The following paper was published:. August 2005 Added a new clustering metho...

4

Tandem Repeats Finder Welcome Page

http://tandem.bu.edu/trf/trf.html

Welcome to Tandem Repeats Finder. Is a public database of tandem repeats that allows users to run their own sequences. It has many added features not available in TRF. Feb 22, 2016 update:. TRF Version 4.09 released. This version fixes issues with centromeres in HG38. See full list of changes on our What's New. Submit a Sequence for Analysis. Download Your Own Copy of the Program. Find Out How TRF Algorithm Works. Find Out What's New. Add Your Email to Our Notification List. Nucleic Acids Research (1999).

5

KNEX DNA Models Introduction

http://tandem.bu.edu/knex/dna.models.knex.html

Page 1 of 11. Developed by Dr. Gary Benson. Department of Biomathematical Sciences. Mount Sinai School of Medicine. All photos by Kevin Kelliher. To download an Acrobat pdf version of this website Click here. Simple and informative models of DNA can be built with K'NEX. To find a particular topic. Model of a negatively supercoiled, circular DNA molecule. K'NEX is a registered trademark of K'NEX Industries Inc., Hatfield, PA 19440-0700, 1-800-KID-KNEX. Under Grant No. CCR-9623532.

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cagt.bu.edu

Labs - CAGT

http://cagt.bu.edu/page/Labs

Create an account or log in. Laboratory for Biocomputing and Informatics. LBI) is a research lab led by Dr. Gary Benson. This laboratory's research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Among our interests are new methods to search for tandem and inverted repeats, alignment and clustering algorithms, seed optimizations and many others. Retrieved from " http:/ cagt.bu.edu/page/Labs.

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tandem.bu.edu

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Http:/ tandem.bu.edu. Laboratory for Biocomputing and Informatics. Our laboratory research focuses on development of algorithms and software tools for the detection and analysis of novel patterns and repeats in DNA and RNA sequences. Our goal is to deliver tools that are effective, efficient and easy to use. We have a number of ongoing collaborations. Please visit our research page for details on our most recent projects. New Vntrseek 1.05 version. Is now available for download. New TRF 4.07b version.

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