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TangoTango: A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains.
http://tango.crg.es/
Tango: A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains.
http://tango.crg.es/
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Tango | tango.crg.es Reviews
https://tango.crg.es
Tango: A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains.
tango.crg.es
About Tango
http://tango.crg.es/about.jsp
A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. The parameters used in the latest version of AGADIR (AGADIR-1s11), have been used to determine the helical propensity of the amino acid sequences. The only modification has been the implementation of a two window approximation (see below). The entropic cost of fixing a particular aminoacid in beta dihedral angles, has been obtained using statistical f,y matrices, as previously published. Dentropy assumes full entro...
References Tango
http://tango.crg.es/references.jsp
A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. When refering to Tango, please reference the following papers. Frederic Rousseau, Joost Schymkowitz , Luis Serrano. Protein aggregation and amyloidosis: confusion of the kinds? Current Opinion in Structural Biology, 2006, 16:1-9 [ PubMed ]. Fernandez-Escamilla AM, Rousseau F, Schymkowitz J, Serrano L. Prediction of sequence-dependent and mutational effects on the aggregation of peptides and proteins.
Examples
http://tango.crg.es/examples.jsp
A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. Examples of Tango calculations. Version 2.3 using input file:. Input file: example.txt. Start of Example.txt - -. Sup2 N N 7 298 0.1 AMAPVLYLQDKSS. Sup2 N N 7 298 0.1 AMASVLYLQDKSS. Sup2 N N 7 298 0.1 AMAPVLYLQSKSS. Sup2 N N 7 298 0.1 AMASVLYLQSKSS. End of Example.txt - -. Each line follow the organisation: "name c-term n-term pH Temperature Ionic Sequence". Run of Tango: Tango.exe -inputfile=example.txt.
Support of Tango
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A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. Website functionality and login, please contact :. Licencing, please contact :. CRG Technology Transfer Office. General Scientific issues regarding the use of Tango, please contact :.
Tango
http://tango.crg.es/tango.jsp
A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. Based on simple physico-chemical principles of secondary structure formation extended by the assumption that the core regions of an aggregate are fully buried. TANGO. Was benchmarked against 175 peptides of over 20 proteins and was able to predict the sequences experimentally observed to contribute to the aggregation of these proteins. Further TANGO. FoldX : A force field for energy calculations in proteins.
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Software | EMBLEM Technology Transfer GmbH - TANGO
https://software.embl-em.de/software/9
Tools, Methods & Assays. News & Events. You need te be a registered User to download EMBLEM Software. Sorry, currently there are no screenshots available. This software is not directly downloadable from our website. Request information on this software. Goto external software page for more info. Back to the software overview. EMBLEM Technology Transfer GmbH. 49 (0) 6221 363 22 10. 49 (0) 6221 363 22 29. Heidelberg Startup Partners e.V. Disclaimer and General Conditions of Use.
Agadir
http://agadir.crg.es/agadir.jsp
An algorithm to predict the helical content of peptides. Is a prediction algorithm based on the helix/coil transition theory. Predicts the helical behaviour of monomeric peptides. It only considers short range interactions. Conditions such as pH, temperature and ionic strength are used in the calculation. Modifications of the termini are also allowed. Keep in mind that Agadir. Is not a program to predict secondary structure of proteins. It is important to consider that the presence of aromatic residues c...
Software | crg
http://www.crg.eu/en/content/scientific-services-scientific-resources/software
International and Scientific Affairs. Technology and Business Development Office. Severo Ochoa Visiting Scientist Programme. Fellowships at the CRG. CRG in the Media. A database for the prediction of protein-protein interactions of modular domains. Serrano s Group (EMBL-CRG Partnership). Type: Database / Category: Protein Function Analysis]. For more information about this software, please click here. An algorithm for the prediction of the helical content of peptides. Agadir is a prediction algorithm bas...
Agadir Links
http://agadir.crg.es/links.jsp
An algorithm to predict the helical content of peptides. Links to related sites. Program for calculating the folding pathways of proteins and the effect of a point mutation on the protein stability. Prediction of b-sheet aggregation. A Cell Network Simulation Program. Predicting amylogenic regions in protein sequences. Prediction of protein-protein interAction of moDular domAiNs. Molecular Phenotypes of Human Diseases. Intrinsic Protein Disorder Prediction.
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Tango - Turismo e Convenções
Tango - Turismo e Convenções. As terras de Basto gostam de tratar bem quem as visita, de fazer de si um amigo. Venha partilhar dos nossos prazeres, na nossa companhia! Peso da Régua desde sempre deu a conhecer ao Mundo a grandeza dos homens que a criaram. É um dos mais antigos e históricos concelhos do Minho. Soube preservar a paisagem na transição entre o Minho e Trás-os-Montes. Portugal é um encanto, todo ele, abraçado pela brisa do mar. Terrestres Bicicleta, Jipe, Mini bus, Comboio Turístico, Autocara...
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Current processing time of 7-10 working days applies for all customized order. We accept urgent orders (to send within 2 working days) with additional charge of $3 per item. Next Baby World Fair - 10 July to 13 July @ Singapore Expo! Photo courtesy of Sharon). Every item you see here is created with the utmost care and attention to every detail. Handmade by a team of very experienced sewers and fabric cutters, we pride ourselves with excellent customer service and most importantly.
Tango en Costa Rica
Tango en Costa Rica. Milonga de Gala Sábado 25 de Julio. Milonga de Gala Cena Milonga Show. Con la participación especial de la cantante Marianela Villalobos. Sábado 25 de julio de las 7:00 PM a las 12:00 MN.En. Publicado a las 20 jul. 2015 11:34. Por Tango Costa Rica. Noche de Tango San Antonio de Belén. En el marco de la celebración de las. Del cantón de San Antonio de Belén, se invita a todo el público a las actividades de una. Publicado a las 9 jun. 2015 17:02. Por Tango Costa Rica.
Tango
A computer algorithm for prediction of aggregating regions in unfolded polypeptide chains. Based on simple physico-chemical principles of secondary structure formation extended by the assumption that the core regions of an aggregate are fully buried. TANGO. Was benchmarked against 175 peptides of over 20 proteins and was able to predict the sequences experimentally observed to contribute to the aggregation of these proteins. Further TANGO. FoldX : A force field for energy calculations in proteins.
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