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theoretical ecology | notes from ecology, biogeography and evolution by Florian Hartignotes from ecology, biogeography and evolution by Florian Hartig (by Florian Hartig)
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notes from ecology, biogeography and evolution by Florian Hartig (by Florian Hartig)
http://theoreticalecology.wordpress.com/
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theoretical ecology | notes from ecology, biogeography and evolution by Florian Hartig | theoreticalecology.wordpress.com Reviews
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notes from ecology, biogeography and evolution by Florian Hartig (by Florian Hartig)
theoreticalecology.wordpress.com
Training school and workshop on calibration and validation of dynamic vegetation models in France | theoretical ecology
https://theoreticalecology.wordpress.com/2015/03/16/training-school-and-workshop-on-calibration-and-validation-of-dynamic-vegetation-models-in-france
Notes from ecology, biogeography and evolution by Florian Hartig. Training school and workshop on calibration and validation of dynamic vegetation models in France. March 16, 2015. Two events I’m involved in that may be interesting for people that work on connecting process-based vegetation models to data. Both are organized through CA 1304 PROFOUND. And fully funded by COST. Mountains around Rencurel / Grenoble. March 16, 2015. Dynamic vegetation models (DVMs). Leave a Reply Cancel reply. You are commen...
3-year PostDoc Position on Connecting Forest Models, Data and Diversity Effects in Freiburg | theoretical ecology
https://theoreticalecology.wordpress.com/2014/11/19/3-year-postdoc-position-on-connecting-forest-models-data-and-diversity-effects-in-freiburg
Notes from ecology, biogeography and evolution by Florian Hartig. 3-year PostDoc Position on Connecting Forest Models, Data and Diversity Effects in Freiburg. November 19, 2014. NOTE: the position has been filled! We still seek applicants for a 3-yr PostDoc project that combines process-based forest models, Bayesian parameter estimation and ecologically the question of what processes cause diversity effects in temperate forests. A pdf with details of the call can be downloaded here. November 19, 2014.
A simple explanation of rejection sampling in R | theoretical ecology
https://theoreticalecology.wordpress.com/2015/04/22/a-simple-explanation-of-rejection-sampling-in-r
Notes from ecology, biogeography and evolution by Florian Hartig. A simple explanation of rejection sampling in R. April 22, 2015. The central quantity in Bayesian inference, the posterior, can usually not be calculated analytically, but needs to be estimated by numerical integration, which is typically done with a Monte-Carlo algorithm. The three main algorithm classes for doing so are. Markov-Chain Monte Carlo (MCMC) sampling. Sequential Monte Carlo (SMC) sampling. 1 draw random value from the prior.
Back from Bayes IV | theoretical ecology
https://theoreticalecology.wordpress.com/2014/09/24/back-from-bayes-iv
Notes from ecology, biogeography and evolution by Florian Hartig. Back from Bayes IV. September 24, 2014. Group photo of the Bayes summer school at Lygra, Norway. As announced a while ago. We had moved our now already traditional summer school in Bayesian Statistics. And the group was fantastic as well, thank you guys! Below a few twitter photos and some nerdy tweets from #lygrabayes. 8211; Paul’s suggestion. To establish #bayesjokes has been noted😉. Mdash; Béatrice Wedeux (@beawedeux) September 20, 2014.
Explaining the ABC-Rejection Algorithm in R | theoretical ecology
https://theoreticalecology.wordpress.com/2014/06/02/explaining-the-abc-rejection-algorithm-in-r
Notes from ecology, biogeography and evolution by Florian Hartig. Explaining the ABC-Rejection Algorithm in R. June 2, 2014. About estimating models with the ABC-MCMC algorithm proposed by Marjoram (2003). As well as about. To the ABC approximation, such as the use of synthetic likelihoods. All of those were based on MCMC methods. However, some recent work made me appreciate the usefulness of the “father” of all ABC algorithms, the ABC rejection sampler first proposed by Tavare (1997). N = 20000 fit = da...
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evolving all we are: SysCall - Distinguishing heterozygous sites from systematic errors
http://maojf.blogspot.com/2013/11/syscall-distinguishing-heterozygous.html
Evolving all we are. SysCall - Distinguishing heterozygous sites from systematic errors. Http:/ bio.math.berkeley.edu/SysCall/. SysCall is a logistic regression based classifier. Given a list of candidate heterozygous genomic locations and a sam file of sequenced reads SysCall classifies each genomic location as either a heterozygous site or a systematic error and outputs according lists, along with the assigned posterior probabilities. The submitted manuscript describing SysCall can be found here. On th...
Field Work – Sweet Tea, Science
https://sweetteascience.com/category/field-work
Sweet Tea, Science. Photo Post: Last PhD Field Season. For your enjoyment, here is the view of my summer, from my smart phone. Honest Tea gave me this gem on a day when I really needed it. Continue reading “Photo Post: Last PhD Field Season”. September 29, 2016. September 29, 2016. Posted in Day in the Life. Continue reading “Grad School Blues”. August 14, 2016. August 23, 2016. Posted in Advice to Grad Students. A Beginner’s Guide to Pokémon Collection in National Parks. Reasonably priced annual passes.
This is Rachel – Sweet Tea, Science
https://sweetteascience.com/tag/this-is-rachel
Sweet Tea, Science. Tag: This is Rachel. This Blog is about My Life (#acutallivingscientist). Last year, maybe October, I was listening to an episode of the. Have I made it too big for online platforms I strive to keep more professional (. Then, last week,. Caught on pretty much simultaneously. #DressLikeAWoman was born in response to an anonymous leak claiming Donald Trump. 8220;to dress like women.” (Whatever that even means.) #ActualLivingScientist was started by. Reportedly in response to a 2011.
evolving all we are: De Novo Transcriptome Assembly with Trinity: Protocol and Videos
http://maojf.blogspot.com/2013/11/de-novo-transcriptome-assembly-with.html
Evolving all we are. De Novo Transcriptome Assembly with Trinity: Protocol and Videos. Http:/ gettinggeneticsdone.blogspot.com/2013/10/de-novo-transcriptome-assembly-trinity.html. 订阅： 帖子评论 (Atom). List of Bioinformatics Workshops and Training Reso. A Mitochondrial Manhattan Plot. SysCall - Distinguishing heterozygous sites from s. PubMed Commons: One post-publication peer review f. Useful Unix/Linux One-Liners for Bioinformatics. De Novo Transcriptome Assembly with Trinity: Proto. Beware of the snail.
Public Speaking – Sweet Tea, Science
https://sweetteascience.com/category/public-speaking
Sweet Tea, Science. Public Speaking Hacks for Scientists. Mer said I couldn’t make this post live unless I included a picture from my speech days. Here I am, in a suit. However, there are plenty of communication situations that don’t involve writing or speaking to a journalist one-on-one. That’s right, the thing folks apparently fear more than death, public speaking. I would contend that. Scientists are, often, not confident or competent public speakers. Sure But public speaking is really hard! Continue ...
Species response curves in JUICE and R | David Zelený
https://davidzeleny.wordpress.com/2010/10/02/20
About me and this blog. Species response curves in JUICE and R. Today I spent some time in attempt to fix the function of Species response curves in JUICE. The script for calculation of species response curves is written in R and it has problems from the whole beginning, but as my interest in using species response curves decreased, the same decreased my will for fixing the bugs. To make it short – I haven’t manage to fix it, and there are several reasons for this. Function, which can be run with data fr...
Tamara Münkemüller - links
http://www.muenkemueller.de/links.html
Uuml;nkemüller - L. A network of young modellers in ecology - http:/ www.yomos.de. A platform for sharing published data and code - http:/ datadryad.org. A platform for collecting information on tools in ecology and evolution - http:/ www.etoology.net. Theoretical Ecology Blog - Florian Hartig. Beautiful graphics in R - R Graph Gallery. A collection of code and tips and tricks - R-leca. Phylogenetics in R - Wiki. Phylogenetics in R - Blog by Liam Revell.
ecologicallyoriented.wordpress.com
Science news/discussion | Ecologically Orientated
https://ecologicallyoriented.wordpress.com/science-newsdiscussion
8230;with frequent whatnot. Skip to primary content. May the forceps be with you. A British obstetrician’s experiences in Sierra Leone). John Baez, mathematical topics in weather and climate). Frequent stories, and very good). Weekly, topical conservation discussions). Very thoughtful and frequent discussions on all manner of topics by a team of three). Steve Walker; ecology notes often emphasizing R coding). Articles and discussions about the use of R in various contexts). Have at it Cancel reply.
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Theoretical Development main - Theoretical Development
8211; Main Menu –. Theoretical Development – for all your business and marketing needs. We pride ourselves on being able to utilise our expertise and experience to deliver results that our clients can see. We understand the need to provide solutions to our clients that are within their means and will not add further pressures to the operation of a business. We understand the need to be efficient within an ever changing market and remain up to date with the latest marketing strategies.
theoreticaldownfall.bandcamp.com
Theoretical Downfall
What You Dont Know Can Hurt You. Its taken a long time, but its here at last! You can download the album in your choice of 320k mp3, FLAC, or just about any other format you could possibly desire. Turn Out The Lights. Its Just the Start. The Middle of Nothing. All music written and performed by Theoretical Downfall. Recorded at AST studios during August - December 2009. Produced, Engineered, Mixed and Mastered by Alasdair Thomson. www.aststudios.co.uk. Additional vocals on Track 6 by Laura Mott.
theoreticaldrama.wordpress.com
Theoretical Drama | When real Drama just isn't good enough.
When real Drama just isn't good enough. 10 Things I learned from Robert Heinlein. An end and a beginning. Fear and the aftermath. Don’t text me if you don’t have time to correct errors. Drinks well with others. Girl on the Contrary. Neil Gaiman's Journal. Notes From The Geek Show. The Wide Eyed Imp. Enter your email address to subscribe to this blog and receive notifications of new posts by email. Join 1 other follower. July 28, 2011. 10 Things I learned from Robert Heinlein. Sin lies only in hurting oth...
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Stochastic Processes in Complex and Biological Systems
Stochastic Processes in Complex and Biological Systems. This page contains some essential information about my research interests. A scientific blog can be found at the following link:. Circular analysis in complex stochastic system. Circular analysis in complex stochastic systems. Http:/ www.nature.com/articles/srep17986. Single-molecule modeling of mRNA degradation by miRNA: Lessons from data. Celine Sin, Davide Chiarugi, Angelo Valleriani. BMC Systems Biology 9. Ribosomes protect the messenger RNA fro...
theoreticalecology.wordpress.com
theoretical ecology | notes from ecology, biogeography and evolution by Florian Hartig
Notes from ecology, biogeography and evolution by Florian Hartig. International Summer School: Introduction to Bayesian Statistics 13. – 18. Sept 2015, Bergen, Norway. Continue reading →. All models are wrong, but which are useful for understanding the effect of nestedness on plant-pollinator dynamics? A simple explanation of rejection sampling in R. The central quantity in Bayesian inference, the posterior, can usually not be calculated analytically, but needs to be estimated by numerical integration, w...
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Theoretical Economics 100
Теоретическая экономика - Главная
Форум Регионов России 2015. Основная цель форума – продемонстрировать инновационный потенциал регионов России, возможности и проекты региональных компаний-инноваторов, найти решения по реальному улучшению их взаимодействия с институтами развития, выстраиванию эффективной работы «инновационных лифтов» и благоприятной институциональной среды для поддержки и развития инноваций на уровне регионов. Объединенная зимняя экономическая школа НИУ ВШЭ. II-я Международная научная конференция Развитие современной Рос...
theoreticaleighspeaking.blogspot.com
Strictly Business
The writing of an intellectually minded but somewhat pop-culture obsessed aspiring journalist. No rhyme or reason, just what I think is newsworthy. Saturday, December 23, 2006. Theres no place like home. Why didn't I realize that my sadness was because I wasn't at home? And it all became so very clear. No matter how much I'd love to claim New York and think that I'm a New Yorker, when it comes down to it, I'm just a Chicago girl, who's making it work, far far away from home.Merry Christmas ;). Why is it ...
Theoretical Electrophysiology | Expanding ideas about how we view the heart's rhythms
About Me…Dr. David Powers. Expanding ideas about how we view the heart's rhythms. June 24, 2015. Is There a Definitive Test for A Fib (or Atrial Fibrillation)? Sadly, it’s not that cut and dry. I didn’t have any inkling I had it until EKG class in paramedic school. Our instructor Mike Fisher at Greenville Technical College had me volunteer for the other students to hook up on the old Lifepac 5 monitor. And BOOM there it was? A true diagnosis may involve some or all of the following…. This message was wri...
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