washugb.blogspot.com

WashU EpiGenome Browser

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Wednesday, April 9, 2014. V37: More options and bug fixes. If youre upgrading from previous version, you need to re-compile subtleKnife.c. This version has many changes listed below:. Go to Apps and use the text box to find apps:. You may be interested to look for these hidden apps: Metadata term finder, Sequence fetcher, Datahub validator. Search by hub or validate to find this app:. 3 Better handling of broken tracks. Combining CHG (CA...

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THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Wednesday, April 9, 2014. V37: More options and bug fixes. If youre upgrading from previous version, you need to re-compile subtleKnife.c. This version has many changes listed below:. Go to Apps and use the text box to find apps:. You may be interested to look for these hidden apps: Metadata term finder, Sequence fetcher, Datahub validator. Search by hub or validate to find this app:. 3 Better handling of broken tracks. Combining CHG (CA...

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WashU EpiGenome Browser | washugb.blogspot.com Reviews

https://washugb.blogspot.com

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Wednesday, April 9, 2014. V37: More options and bug fixes. If youre upgrading from previous version, you need to re-compile subtleKnife.c. This version has many changes listed below:. Go to Apps and use the text box to find apps:. You may be interested to look for these hidden apps: Metadata term finder, Sequence fetcher, Datahub validator. Search by hub or validate to find this app:. 3 Better handling of broken tracks. Combining CHG (CA...

INTERNAL PAGES

washugb.blogspot.com

1

WashU EpiGenome Browser: v35: hammock tracks for richly annotated genomic features

http://washugb.blogspot.com/2014/03/v35-hammock-tracks-for-richly-annotated.html

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Saturday, March 22, 2014. V35: hammock tracks for richly annotated genomic features. The hammock tracks is a new track type for displaying richly annotated genomic feature on the browser. It's simple and straight, succinct by having only 4 columns, versatile for the JSON field, and can do awesome things. The current format specification is here:. Http:/ wiki.wubrowse.org/Hammock. The same repeat track as above, displayed in " barplot.

2

WashU EpiGenome Browser: April 2014

http://washugb.blogspot.com/2014_04_01_archive.html

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Wednesday, April 9, 2014. V37: More options and bug fixes. If youre upgrading from previous version, you need to re-compile subtleKnife.c. This version has many changes listed below:. Go to Apps and use the text box to find apps:. You may be interested to look for these hidden apps: Metadata term finder, Sequence fetcher, Datahub validator. Search by hub or validate to find this app:. 3 Better handling of broken tracks. Combining CHG (CA...

3

WashU EpiGenome Browser: July 2013

http://washugb.blogspot.com/2013_07_01_archive.html

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Sunday, July 28, 2013. V22 (3 of 3): better track search, and information display. You can quickly find track using the track search. On browser, click "Tracks" and find the search box:. Enter keywords and press "Search" or hit Enter. To use multiple keywords, join them by "AND". To see information of a track, right click and select Information:. Track information will be shown as various categories:. V22 (2 of 3): public datahubs. To se...

4

WashU EpiGenome Browser: September 2013

http://washugb.blogspot.com/2013_09_01_archive.html

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Monday, September 23, 2013. V24 (3 of 3): facet panel. Facet panel" is a meaningful way to present large track set using metadata annotation. Version 24 features much improved facet table function. Improved user interface design. Unified support on both native and custom metadata vocabularies. Find the facet panel. At the browser, click "Tracks" "Experimental assay tracks". Following panel will be shown (example from hg19):. The metadata...

5

WashU EpiGenome Browser: Prepare custom track of numerical data

http://washugb.blogspot.com/2012/09/generate-tabix-files-from-bigwig-files.html

THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Sunday, September 9, 2012. Prepare custom track of numerical data. Make sure you have the tabix. You can download the latest source and compile:. Or if you're using Ubuntu operating system, install it using apt-get:. You should have both tabix. Programs available on your computer. Skip this step if your file is bedGraph. In UCSC genome browser tool set and convert the bigWig file to a. Compress the bedgraph text file:. Generate tabix fil...

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lidaof.blogspot.com

Daofeng Li: Install WashU Epigenome Browser mirror at a fresh Ubuntu server

http://lidaof.blogspot.com/2013/06/install-washu-epigenome-browser-mirror.html

Thursday, June 27, 2013. Install WashU Epigenome Browser mirror at a fresh Ubuntu server. The official blog for WashU Epigenome Browser: http:/ washugb.blogspot.com/. The official release for source code of WashU Epigenome Browser: here. The main site for WashU Epigenome Browser: http:/ epigenomegateway.wustl.edu/. Please also see this post. From the author of WashU Epigenome Browser for installation instructions. Note: the default tracks come from the Roadmap Epigenomics Project. 0, before start. Sudo a...

lidaof.blogspot.com

Daofeng Li: June 2013

http://lidaof.blogspot.com/2013_06_01_archive.html

Thursday, June 27, 2013. Install WashU Epigenome Browser mirror at a fresh Ubuntu server. The official blog for WashU Epigenome Browser: http:/ washugb.blogspot.com/. The official release for source code of WashU Epigenome Browser: here. The main site for WashU Epigenome Browser: http:/ epigenomegateway.wustl.edu/. Please also see this post. From the author of WashU Epigenome Browser for installation instructions. Note: the default tracks come from the Roadmap Epigenomics Project. 0, before start. Sudo a...

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THIS BLOG IS NO LONGER UPDATED and I no longer work on the Browser. Wednesday, April 9, 2014. V37: More options and bug fixes. If youre upgrading from previous version, you need to re-compile subtleKnife.c. This version has many changes listed below:. Go to Apps and use the text box to find apps:. You may be interested to look for these hidden apps: Metadata term finder, Sequence fetcher, Datahub validator. Search by hub or validate to find this app:. 3 Better handling of broken tracks. Combining CHG (CA...

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