webapps.embl-hamburg.de

Webapps @ EMBL Hamburg

This web-server provides access to the computational tools developed in the Schneider group. Click the software tool names in the table to go to the respective web pages. Download the programs directly by using the. Shortcuts; you can also download. PDF files with program guides. Graphical user interface for macromolecular phasing with the SHELXC/D/E suite of programs. Command line tool for substructure site comparison in the macromolecular phasing context. Download of HKL2MAP and SITCOM in one bundle.

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Webapps @ EMBL Hamburg | webapps.embl-hamburg.de Reviews

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This web-server provides access to the computational tools developed in the Schneider group. Click the software tool names in the table to go to the respective web pages. Download the programs directly by using the. Shortcuts; you can also download. PDF files with program guides. Graphical user interface for macromolecular phasing with the SHELXC/D/E suite of programs. Command line tool for substructure site comparison in the macromolecular phasing context. Download of HKL2MAP and SITCOM in one bundle.

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1 webapps embl hamburg de

2 at embl hamburg

3 quick access

4 hkl2map

5 program discription

6 download page

7 download pdf

8 sitcom

9 rapido

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Webapps @ EMBL Hamburg | webapps.embl-hamburg.de Reviews

https://webapps.embl-hamburg.de

This web-server provides access to the computational tools developed in the Schneider group. Click the software tool names in the table to go to the respective web pages. Download the programs directly by using the. Shortcuts; you can also download. PDF files with program guides. Graphical user interface for macromolecular phasing with the SHELXC/D/E suite of programs. Command line tool for substructure site comparison in the macromolecular phasing context. Download of HKL2MAP and SITCOM in one bundle.

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webapps.embl-hamburg.de

1

Webapps download (step 1 of 3)

http://webapps.embl-hamburg.de/bundle/download.php?hkl2mp=false&sitcom=true

Downloadable software can be requested from this site. For academic use, our software can be downloaded freely after registration. Commercial users should contact Thomas Schneider. Please fill this form with your registration data. Every field is mandatory. Select the programs you want to download (multiple items will be bundled). Shortly after you will have submitted the request, you will receive an e-mail sent to the specified address, containing the actual download link. British Indian Ocean territory.

2

____HKL2Map____

http://webapps.embl-hamburg.de/hkl2map/index.html

HKL2MAP is a graphical user-interface for macromolecular phasing. Running as a Tcl/Tk client, it is platform-independent, and in combination with the SHELX software it can be used on Linux as well as MacOS X platforms. To use HKL2MAP, you need to have licenced versions of SHELXC/D/E and Coot in the executable path of your computer. If you use HKL2MAP in you work, please cite the following publication:. Thomas Pape and Thomas R. Schneider. HKL2MAP: a graphical user interface for phasing with SHELX programs.

3

RAPIDO - Rapid Alignment of Protein Structure in case of Domain motions

http://webapps.embl-hamburg.de/rapido

RAPIDO is an algorithm for the 3D alignment of protein structures. In order to align your protein structures:. Either by providing a comma separated list of PDB IDs or by uploading a zipped tarball of you PDB files (use the unix command: tar czvf tarball.tgz list-of-pdb-files. Insert your e-mail address. An email with a confirmation and a link for accessing the results will be sent to this e-mail address. A help page for RAPIDO is available here. List of PDB IDs:. In citing RAPIDO please refer to:. RM an...

4

____SITCOM____

http://webapps.embl-hamburg.de/sitcom

SitCom is a program for the comparison of heavy atom sites from two or more macromolecule derivative substructures. The most recent version 0.17.3 has beta-test status. How to obtain the program. The distribution comes as precompiled binary for Linux or MacOs (Darwin). It is obtained via download. First, go to the download form using the top menu, fill the form and submit. After a few minutes you will receive an e-mail with the download page link. From your local terminal, you are past the preparation st...

5

Webapps download (step 1 of 3)

http://webapps.embl-hamburg.de/bundle/download.php?hkl2mp=true&sitcom=false

Downloadable software can be requested from this site. For academic use, our software can be downloaded freely after registration. Commercial users should contact Thomas Schneider. Please fill this form with your registration data. Every field is mandatory. Select the programs you want to download (multiple items will be bundled). Shortly after you will have submitted the request, you will receive an e-mail sent to the specified address, containing the actual download link. British Indian Ocean territory.

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Webapps @ EMBL Hamburg

This web-server provides access to the computational tools developed in the Schneider group. Click the software tool names in the table to go to the respective web pages. Download the programs directly by using the. Shortcuts; you can also download. PDF files with program guides. Graphical user interface for macromolecular phasing with the SHELXC/D/E suite of programs. Command line tool for substructure site comparison in the macromolecular phasing context. Download of HKL2MAP and SITCOM in one bundle.

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