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WormTSS: The Primary Transcriptome of C.elegans

WormTSS: The Primary Transcriptome of C. elegans. Despite the fundamental importance of transcription start sites (TSSs), little is known about TSSs in C. elegans. This is due to the high frequency of. MRNAs, a process which post-transcriptionally removes RNA segments of variable length from the 5'end of mature mRNAs. WormTSS. Powerd by UTGB Toolkit.

http://wormtss.utgenome.org/

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WormTSS: The Primary Transcriptome of C.elegans | wormtss.utgenome.org Reviews
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WormTSS: The Primary Transcriptome of C. elegans. Despite the fundamental importance of transcription start sites (TSSs), little is known about TSSs in C. elegans. This is due to the high frequency of. MRNAs, a process which post-transcriptionally removes RNA segments of variable length from the 5'end of mature mRNAs. WormTSS. Powerd by UTGB Toolkit.
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7 trans splicing
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WormTSS: The Primary Transcriptome of C.elegans | wormtss.utgenome.org Reviews

https://wormtss.utgenome.org

WormTSS: The Primary Transcriptome of C. elegans. Despite the fundamental importance of transcription start sites (TSSs), little is known about TSSs in C. elegans. This is due to the high frequency of. MRNAs, a process which post-transcriptionally removes RNA segments of variable length from the 5'end of mature mRNAs. WormTSS. Powerd by UTGB Toolkit.

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WormTSS: The Primary Transcriptome of C.elegans

http://wormtss.utgenome.org/browser/browser.jsp

Use cursor key left/right to scroll horizontally, up: zoom out, down: zoom in. Powerd by UTGB Toolkit.

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WormTSS: The Primary Transcriptome of C.elegans

http://wormtss.utgenome.org/browser/download.jsp

Embryo TSS list (Excel) - 2013 Mar. Adult TSS list (Excel) - 2013 Mar. 5'SAGE Illumina single-end read (76bp). Embryo: read alignment BAM file. TSS peak data WIG file. Adult: read alignment BAM file. TSS peak data WIG file. 5'SAGE Illumina paired-end read (76bp-76bp). Embryo: read alignment BAM file. All raw reads are available in SRA ( SRA060670. Browsing with UCSC Genome Browser. To browse raw reads in UCSC Genome Browser, visit Manage Custom Tracks. With chromosome names I, II, ., etc.

3

WormTSS: The Primary Transcriptome of C.elegans

http://wormtss.utgenome.org/browser/AllTSSList

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xerial.org xerial.org

Publications | xerial.org

http://xerial.org/publication

Taro L. Saito. Taro L. Saito. Toshiya Nishimura, Amaury Herpin, Tetsuaki Kimura, Ikuyo Hara, Toshihiro Kawasaki, Shuhei Nakamura, Yasuhiro Yamamoto, Taro L. Saito. Jun Yoshimura, Shinichi Morishita, Tatsuya Tsukahara, Satoru Kobayashi, Kiyoshi Naruse, Shuji Shigenobu, Noriyoshi Sakai, Manfred Schartl, and Minoru Tanaka. Analysis of a novel gene, Sdgc, reveals sex chromosome-dependent differences of medaka germ cells prior to gonad formation. July 30, 2014, doi:10.1242/dev.106864. Taro L. Saito. Matthias ...

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Taro L. Saito, Ph.D. | xerial.org

http://xerial.org/leo

Taro L. Saito. Taro L. Saito, Ph.D. Software Engineer at Treasure Data, Inc. Language Skills: Scala (current favorite), Java, C/C , Ruby, Perl, R, Scheme, OCaml, Z80, etc. GitHub https:/ github.com/xerial. BitBucket https:/ bitbucket.org/xerial. Tutorial of the Scala programming language. Presentation Slides @ SlideShare. Leo's Chronicle (in Japanese): http:/ leoclock.blogspot.com. Xerial Blog: http:/ voice.xerial.org. April 2005 - March 2007. April 2007 - February 2014. March 2014 - June 2015. MachiBase...

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Genome Sciences | xerial.org

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Taro L. Saito. Cluser Computing Platform for Genome Sciences. Personal genome analysis involves massive amount of data analysis: genome sequence alignment, SNP calls, finding desease-related mutations, etc. These data analysis involves tons of data managment (e.g., compression, file I/O, table joins, filtering, etc.) Silk supports running these complex data analysis pipeline in a cluster machine. Genome browsers developed by UTGB. The Primary Transcriptome of. This is due to the high frequency of trans-s...

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WormTSS: The Primary Transcriptome of C.elegans

WormTSS: The Primary Transcriptome of C. elegans. Despite the fundamental importance of transcription start sites (TSSs), little is known about TSSs in C. elegans. This is due to the high frequency of. MRNAs, a process which post-transcriptionally removes RNA segments of variable length from the 5'end of mature mRNAs. WormTSS. Powerd by UTGB Toolkit.

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