wurmlab.github.io

Wurm Lab - Ants, Genomes & Evolution Lab @ Queen Mary University London

Ants, Genomes and Evolution. Queen Mary University London. Evolutionary genomics of social insects. Extensive theoretical work has explained how and why complex societies evolve. However, only little is known about the genes and molecular mechanisms responsible for social phenotypes. We are interested in themes including the genetics of behavior, the interplay between social evolution and genome evolution, and the molecular mechanisms responsible for differences between castes. The recent 10,000-fold dro...

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Wurm Lab - Ants, Genomes & Evolution Lab @ Queen Mary University London | wurmlab.github.io Reviews

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Ants, Genomes and Evolution. Queen Mary University London. Evolutionary genomics of social insects. Extensive theoretical work has explained how and why complex societies evolve. However, only little is known about the genes and molecular mechanisms responsible for social phenotypes. We are interested in themes including the genetics of behavior, the interplay between social evolution and genome evolution, and the molecular mechanisms responsible for differences between castes. The recent 10,000-fold dro...

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1 research

2 publications

3 teaching

4 team

5 press coverage

6 news

7 tools

8 for example we

9 solenopsis invicta

10 clock genes

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research,publications,teaching,team,press coverage,news,tools,for example we,solenopsis invicta,clock genes,chemosensory proteins csps,olfactory receptors,and vitellogenin genes,genome bioinformatics,we developed genevalidator,pollinator health,yannick

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Wurm Lab - Ants, Genomes & Evolution Lab @ Queen Mary University London | wurmlab.github.io Reviews

https://wurmlab.github.io

Ants, Genomes and Evolution. Queen Mary University London. Evolutionary genomics of social insects. Extensive theoretical work has explained how and why complex societies evolve. However, only little is known about the genes and molecular mechanisms responsible for social phenotypes. We are interested in themes including the genetics of behavior, the interplay between social evolution and genome evolution, and the molecular mechanisms responsible for differences between castes. The recent 10,000-fold dro...

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wurmlab.github.io

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Wurm Lab - Yannick Wurm' News

http://wurmlab.github.io/news

Ants, Bees, Genomes and Evolution. Queen Mary University London. Excellent work by GSoC Bioinformatics students. Google summer of code 2016 has just came to an end. Thanks to our host organisations Open Genome Informatics. And Open Bioinformatics Foundation. We’ve had a productive summer with two excellent students. Both students wrote blog posts summarizing their work. Created novel BLAST result visualization methods for SequenceServer. He wrote an overview of his work. September 1, 2016. Problem statem...

2

Wurm Lab - GeneValidator

http://wurmlab.github.io/tools/genevalidator

Ants, Bees, Genomes and Evolution. Queen Mary University London. GeneValidator is a tool to identify problematic gene predictions based on comparisons between gene predictions and similar sequences in public databases (e.g., SwissProt). Funded by NESCent Google Summer of Code 2013. Nucleotide sequences (picked from European Nucleotide Archive. Amino acid sequences (picked from ongoing genome projects). Please cite: Dragan M. From the command line. As a web app. Or nucleotide sequence (e.g., D. Go to the ...

3

Wurm Lab - tools and code

http://wurmlab.github.io/tools

Ants, Bees, Genomes and Evolution. Queen Mary University London. Major tools that we develop include:. BLAST is the most commonly used bioinformatics tool. But setting it up for private data and using it is counter-intuitive. We developed SequenceServer to make BLAST easy to use. Downloaded over 30,000 times. Tool to identify problematic gene predictions based on comparison with gene predictions in public databases. Funded by NESCent Google Summer of Code 2013. NeuroPeptide Search uses the common feature...

4

Wurm Lab - Teaching

http://wurmlab.github.io/teaching

Ants, Bees, Genomes and Evolution. Queen Mary University London. Bioinformatics and Population Genomics. Prepared with Rodrigo Pracana, Julien Roux, Rob Waterhouse and Stefan Schiffels for a 1 week Bioinformatics and Population Genomics. Course. [Overview slides]. We use similar material for QMUL’s Bioinformatics MSc. And our Ecological and Evolutionary Genomics MSc. Reads to genome to gene predictions. Short read cleaning, genome assembly, quality control, gene prediction, quality control. [Slides].

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Dessimoz Lab -- Links

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Swiss Institute of Bioinformatics. Computational Evolutionary Biology and Genomics. Our databases and software implementations. Orthologous MAtrix), which classifies genes from around 2000 species into families of orthologs. To identify orthologs among custom genomes. A powerful yet easy-to-use gene/genome sequence simulation tool (available both as downloadable version and web interface). A highly optimised Smith-Waterman implementation for x86 and IBM Cell B.E. architectures.

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Wurm Lab - Ants, Genomes & Evolution Lab @ Queen Mary University London

Ants, Genomes and Evolution. Queen Mary University London. Evolutionary genomics of social insects. Extensive theoretical work has explained how and why complex societies evolve. However, only little is known about the genes and molecular mechanisms responsible for social phenotypes. We are interested in themes including the genetics of behavior, the interplay between social evolution and genome evolution, and the molecular mechanisms responsible for differences between castes. The recent 10,000-fold dro...

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