plantontology.org
Ontology and database access from collaborator projects | Plant Ontology (PO)
http://www.plantontology.org/node/278
Ontology and database access from collaborator projects. The Plant Ontology database and the websites are also accessible from following resources. Served from iPlant ( iPlantCollaborative. Mirrors our live database and website. Ontology Lookup Service from EBI [ Search. Disclaimer: Except for the ontology hosted at the iPlant infrastructure, the versions available from other resources may not be in sync with our live site. Plant Ontology (PO) by www.plantontology.org.
plantontology.org
New Plant Ontology Release #20 Available | Plant Ontology (PO)
http://www.plantontology.org/node/221
New Plant Ontology Release #20 Available. Greetings from the Plant Ontology! We are pleased to announce that the latest release of the Plant Ontology, version #20, is available on our browser at http:/ www.plantontology.org. For full details of the changes, please see: the Release 20 page at: http:/ wiki.plantontology.org/index.php/Release 20. Addition of 48 new terms, for both the Plant Anatomical Entity (44) and Plant Structure Development Stage (4) branches. Inflorescence branch (PO:0009081) and its c...
plantontology.org
Plant Ontology License | Plant Ontology (PO)
http://www.plantontology.org/node/279
Plant Ontology (PO) by www.plantontology.org. Is licensed under a Creative Commons Attribution 4.0 International License. Based on a work at www.plantontology.org. The License terms and conditions include the following:. You are free to share (copy and redistribute the material in any medium or format) and adapt (remix, transform, and build upon the material) the existing dataset. Annotations provided through our website, database and the archives unless specified, remain under the licensees of the sourc...
plantontology.org
Glossary of Plant Anatomy | Plant Ontology (PO)
http://www.plantontology.org/glossary
Glossary of Plant Anatomy. Abaxial epidermis of ovary. Plant anatomy term ]. The epidermal cell layer of the abaxial/outer surface of the ovary. Epidermis abaxial del ovario (Spanish), 子房の裏側 背軸側の表皮 (Japanese). Plant anatomy term ]. A portion of plant tissue that is the abaxial/lower portion of the nucellus overlying the vascular strands in the grass caryopsis. 背軸側珠心突起 (Japanese), proyección nucelar abaxial (Spanish). Plant anatomy term ]. A petiole canal on the abaxial surface of a petiole. The epide...
plantontology.org
Publications and Presentations | Plant Ontology (PO)
http://www.plantontology.org/biblio
2015 Finding Our Way through Phenotypes. PLoS Biol. 13:e1002033. 2014 The Plant Ontology and the Trait Ontology: Resources for Plant Genomics. Workshop on Crop Ontology and Phenotyping Data Interoperability. 2014 Common Reference Ontologies for Plant Biology (cROP): A Platform for Integrative Plant Genomics. Plant and Animal Genome XXII Meeting. 2014 Plant Environmental Condition Ontology (EO). Fourth Annual Summit of the Phenotype Ontology Research Coordination Network. Plant and Animal Genome 2013.
plantontology.org
Software | Plant Ontology (PO)
http://www.plantontology.org/software
The software(s) developed by the Plant Ontology project are available for download from this website. Annotation of image segments with ontologies (AISO). Plant Ontology (PO) by www.plantontology.org. Under a Creative Commons Attribution 4.0 International License. Based on a work at www.plantontology.org. Plant Ontology is an international collaborative effort. And is supported by primary funding ( IOS:0822201 award. From the National Science Foundation of USA. Plant Ontology Release #21 Now Available.
plantontology.org
Search or Browse the Plant Ontology Database | Plant Ontology (PO)
http://www.plantontology.org/home
Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...
plantontology.org
Documentation and resources on various PO related activities | Plant Ontology (PO)
http://www.plantontology.org/node/5
Documentation and resources on various PO related activities. Plant Ontology project Wiki site. Provides much of the project documents from following links. Such documents are meant for our users and collaborators, including ontology developers:. Plant Ontology development guidelines. Instructions for submitting annotations. Plant Ontology (PO) by www.plantontology.org. Under a Creative Commons Attribution 4.0 International License. Based on a work at www.plantontology.org.
plantontology.org
PO Web Services / APIs | Plant Ontology (PO)
http://www.plantontology.org/node/10
PO Web Services / APIs. Plant Ontology terms and synonyms are available for use in mobile and desktop applications via RESTful web services. These services, fully accessible to software developers, are encoded in JSON format, a widely-used standard for providing data over the internet (learn more about RESTful web services. And the JSON specification. There are two services available at this time:. Term (and Synonym) Search. Make an HTTP GET request to this URI:. Include accession ID's listed as synonyms.
plantontology.org
DNA Biology and Bioinformatics summer camp for high school students at Oregon State University. | Plant Ontology (PO)
http://www.plantontology.org/node/224
DNA Biology and Bioinformatics summer camp for high school students at Oregon State University. Did you know that there are millions of DNA building blocks encoded in the genome of a plant? How can scientists possibly study this vast amount of data? A close relative of the modern day bread wheat. Using the rice chloroplast genome sequence available from the EMBL data archive as a starting point, students explored bioinformatics software, tools, and databases (including Artemis, Pfam, Cn3D, etc.) scie...
