plantontology.org

Search or Browse the Plant Ontology Database | Plant Ontology (PO)

Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

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Search or Browse the Plant Ontology Database | Plant Ontology (PO) | plantontology.org Reviews

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Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

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Search or Browse the Plant Ontology Database | Plant Ontology (PO) | plantontology.org Reviews

https://plantontology.org

Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

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dev.plantontology.org

Search or Browse the Plant Ontology Database | Plant Ontology (PO)

Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

archive.plantontology.org

Search or Browse the Plant Ontology Database | Plant Ontology (PO)

Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

wiki.plantontology.org

Plant Ontology Wiki

The PO wiki site will be down for maintenance on Tuesday August 18th while the data center undergoes some hardware replacement. The site will be available once maintenance is complete. From Plant Ontology Wiki. Welcome to the Plant Ontology Wiki. Plant Ontology Consortium Resources. About the Plant Ontology project. PO Releases and Database Updates. POC workshops and other meetings. Links to sites using the PO. Publications and Other Resources. Plant Ontology Development Guidelines. Buffalo, NY May 2013.

INTERNAL PAGES

plantontology.org

1

Plant Ontology Release #21 Now Available | Plant Ontology (PO)

http://www.plantontology.org/node/288

Plant Ontology Release #21 Now Available. We are pleased to announce that the latest release of the Plant Ontology, version #21, is now available on our browser at http:/ www.plantontology.org. One major change you may see is that on August 1, 2015, all the ontology files and issue tracker were moved to a shiny new GitHub Site: ( https:/ github.com/Planteome/plant-ontology. As part of the Planteome Project. Please update your local browser bookmarks, and come check out the new functionalities. For comple...

2

Collaborations | Plant Ontology (PO)

http://www.plantontology.org/node/8

UK: John Doonan and Georgios Gkoutos (Coordinators; Aberystwyth Univ), Paul Kersey EBI, Luke Ramsay and Dave Marshall (J. Huttion Inst.), Chris Rawlings (Rothamstead). France: Cyril Pommier, Jacques Legouis, Francois Tardieu (INRA). Germany: Fabio Fiorani and Uli Schurr (Julich) Bjorn Usadel (Aachen Univ.),. Eva Huala (Stanford Univ.), Doreen Ware ( Gramene Database. Chris Town ( Arabidopsis Information Portal. Mary Schaeffer and Carolyn Lawrence ( MaizeGDB. Doreen Ware ( Gramene Database. Eva Huala ( Ph...

3

Systems Biology and Ontologies Workshop at Plant and Animal Genome 2014 Meeting | Plant Ontology (PO)

http://www.plantontology.org/node/229

Systems Biology and Ontologies Workshop at Plant and Animal Genome 2014 Meeting. The PO will host a Workshop entitled Systems Biology and Ontologies. On Saturday, January 11th at the Plant and Animal Genome 2014. Meeting, in San Diego, CA. Presentations will cover a range of subjects from molecular networks, systems biology and their integration with ontologies to find novel insights into plant biology. If you are attending PAG this year, please join us at the workshop. Selaginella apoda lifecycle annota...

4

Download the Plant Ontology or the Annotation Database | Plant Ontology (PO)

http://www.plantontology.org/download

Download the Plant Ontology or the Annotation Database. Beginning with Version #14 (January 2011), the Plant Ontology has been merged from two separate files (po anatomy and po temporal) into a single file called 'plant ontology'. We recommend that all users switch to the single, merged file. If you need current versions of the po anatomy.obo and po temporal.obo files, please contact us. Accessing the Plant Ontology using GitHub repository (recommended for advanced users). Based on a work at www.plan...

5

Finding Our Way through Phenotypes | Plant Ontology (PO)

http://www.plantontology.org/node/287

Finding Our Way through Phenotypes. Finding Our Way through Phenotypes. Imagine if we could compute across phenotype data as easily as genomic data; this article calls for efforts to realize this vision and discusses the potential benefits. Http:/ dx.doi.org/10.1371%2Fjournal.pbio.1002033. Plant Ontology (PO) by www.plantontology.org. Under a Creative Commons Attribution 4.0 International License. Based on a work at www.plantontology.org. Plant Ontology is an international collaborative effort.

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plantsci.arabidopsis.info

NASC Bioinformatics

http://plantsci.arabidopsis.info/bioinformatics/webservices/index.html

The European Arabidopsis Stock Centre. Bio: Affymetrix Perl modules. Programming using the NASCArrays website and XML. NASC Data And Webservices. NASC provides programmatic access to various data resources and analysis tools via Webservice technologies. Webservices technologies enable integration and inter-operation between client and server software. The technology is built on open standards: Representational state transfer (REST): a software architecture style. Simple Object Access Protocol...Arabidops...

planteome.org

Tools | Planteome

http://www.planteome.org/node/3

AISO (Annotation of Image Segments with Ontologies). AISO is a freely available, Java-based desktop application. It currently available on Linux, Mac OS X (64-bit), and Windows (32-bit). AISO is developed as part of the Plant Ontology. Project (NSF Award #0822201. The most recent version of AISO (including installation instructions). View mock annotations using the AISO. Community Annotation Wiki Prototype. Planteome by http:/ planteome.org. Based on a work at planteome.org. Latest Tweets from @Planteome.

planteome.org

Project Participants and Collaborations | Planteome

http://www.planteome.org/node/6

Project Participants and Collaborations. Pankaj Jaiswal [ Plant Ontology. Sinisa Todorovic [ lab website. Eugene Zhang [ lab website. Laurel Cooper [ Plant Ontology. New York Botanical Garden. Dennis Stevenson [ lab website. Lawrence Berkeley National Laboratory. Chris Mungall [ lab website. Bioversity International and Crop Ontology Project. Elizabeth Arnaud [ Crop Ontology Website. Leo Valette- Integrated Breeding Platform [ IBP website. And many other partners at all the CG Centers. Jean-Luc Jannink),...

arabidopsis.org.uk

NASC Bioinformatics

http://arabidopsis.org.uk/bioinformatics/webservices/index.html

The European Arabidopsis Stock Centre. Bio: Affymetrix Perl modules. Programming using the NASCArrays website and XML. NASC Data And Webservices. NASC provides programmatic access to various data resources and analysis tools via Webservice technologies. Webservices technologies enable integration and inter-operation between client and server software. The technology is built on open standards: Representational state transfer (REST): a software architecture style. Simple Object Access Protocol...Arabidops...

wilkinsonlab.info

Plant-Pathogen Interactions Ontology | Wilkinson Laboratory

http://www.wilkinsonlab.info/lab/PPIO

Adrian Jose Garcia Puertas. Annotating and Mining Bioinformatics Workflows. Evolution of Poly-A Machinery. Plant pathogens are one of the main causes of crop losses worldwide, and for that reason are subject of intensive study in many research centers. One of the best characterized bacterial genus is. This genus contains some members that have a non-pathogenic lifestyle and others that exhibit plant pathogenic activity, like the extensively studied bacterium. Affecting many different plant species. As of...

jaiswallab.cgrb.oregonstate.edu

NSF Funds Development of Common Reference Ontologies and Applications for Plant Biology | Jaiswal Lab | Oregon State University

http://jaiswallab.cgrb.oregonstate.edu/node/126

Search for people and pages. Select to search All of OSU. Select to search for People. Select to search for Media. NSF Funds Development of Common Reference Ontologies and Applications for Plant Biology. Submitted by pankaj on Mon, 04/27/2015 - 13:46. NSF recently awarded funding to the Planteome Project ( http:/ www.planteome.org. Corvallis, OR, April 24, 2015 (Newswire) - The NSF’s Plant Genome Research Program recently awarded funding to The Planteome Project ( http:/ www.planteome.org. As part of the...

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Search or Browse the Plant Ontology Database | Plant Ontology (PO)

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plantontology.org

Search or Browse the Plant Ontology Database | Plant Ontology (PO)

Search or Browse the Plant Ontology Database. Example Searches: type 'endosperm' or 'PO:0009089' and select 'PO terms'. Type: 'CONSTANS' or 'AT5G15850' and select 'Annotations'. More options: Browse PO. Links to: Plant Anatomy Glossary;. About Plant Ontology (PO). Beginning in January 2011 (Version #14), the Plant Ontology was merged into a single ontology file (from two separate files) encompassing the following two aspects:. Examples of plant anatomical entities are plant structures ( PO:0009011. Plant...

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