bioinfo.cnio.es

firedb.bioinfo.cnio.es

FireDB - firestar

Structural Biology and Biocomputing Programme. FireDB is a database of Protein Data Bank. Structures, ligands and annotated functional site residues. The database can be accessed by PDB codes or UniProt. Accession numbers as well as keywords. Predicts functionally important residues based on the FireDB database. The predictions are based on the local evaluation of alignments between the query sequence and the structures with functional information that are stored in FireDB. firestar. The Server for Quick...

ecid.bioinfo.cnio.es

EciD

Pg connect() [ function.pg-connect. Unable to connect to PostgreSQL server: could not connect to server: Connection refused Is the server running on host ubio.cnio.es and accepting TCP/IP connections on port 5432? An error ocurred during conexion .

cargo.bioinfo.cnio.es

CARGO: Welcome

HOW TO USE IT. To start using CARGO, follow these steps:. For a term (like regulation) or gene name (p53)- complex searches are not supported yet- to obtain a list of genes or use one of our previously compiled gene list (Sjoblom et al. Science, 2006 or Matsuoka et al. Science, 2007);. A few widgets by clicking either on their names. Top left ) or in their tabs. Top of the dashboard);. A detailed tutorial of CARGO could be downloaded from here. CARGO works best in Firefox. And other Gecko-based browsers.

cargo2.bioinfo.cnio.es

CARGO: Welcome

Currently, CARGO displays biological information only for human genes. Information for other species will be included. CARGO is involved in some projects as Cargo, BioSapiens, or as INB. If you want to see CARGO Beta version, click here. Do you already have a CARGO account? If you want to create your own widget for CARGO, consult the following tutorial. CARGO works best in Firefox. And other Gecko-based browsers. It works fine now in Opera and in the latest versions of Safari (3 or above).

appris.bioinfo.cnio.es

{APPRIS} - Annotating principal splice isoforms

structureppi.bioinfo.cnio.es

Structure

This workflow offers several functionalities to explore the consequence of protein mutations. It reports features that overlap the mutations, or that are in close physical proximity. This workflow makes use of PDB files to calculate residues in close proximity. This information is used to find features close to the mutations, at a distance of 5 angstroms, or mutations in residues close to residues in a complex partner, at a distance of up to 8 angstroms. Bioinformatics (2015); 31(14):2397-2399. Use the f...

icap2016.bioinfo.cnio.es

Welcome

We would like to invite you to the 25th International Conference on Arginine and Pyrimidines (ICAP 2016), which will be held in Granada (Spain) July 6-9, 2016. The venue for the event is the Hotel Carmen, located in the heart of the monumental and enchanting city of Granada. ICAP conferences are biennial meetings. This year the meeting is the 25th, and therefore, it appears that these conferences started 50 years ago, a true gold anniversary! We look forward to meeting you in Granada!

kinmut2.bioinfo.cnio.es

KinMut2

Submit variants for analysis. WKinMut-2 is an integrated framework for the analysis and interpretation of the consequences of variants in the human kinome. It displays information from diverse sources, that include:. Protein/Gene general information, Gene Ontology terms, estimations of gene essentiality in orthologues and known drug targets. Structural information from PDB and Structure-PPI. Predictions of variant pathogenicity with 9 different methods, including our own kinase-specific Random Forest.

tebacten.bioinfo.cnio.es

Welcome to Tebacten

TeBactEn (text mining for bacterial enzymes). TeBactEn is a tool designed to facilitate the retrieval, extraction and annotation of bacterial enzymatic reactions and pathways from the literature. The system has been developed in the context of the Microme. In case of all three TeBactEn data collections, an exhaustive recognition of mentions of all species and taxonomic entities was carried out. Identification of metabolism relevant articles. Detection of the bio-entities involved in biochemical reactions:.

limtox.bioinfo.cnio.es

Welcome to LimTox

What are you searching? What are you searching? See: http:/ en.wikipedia.org/wiki/Simplified molecular-input line-entry system". See: http:/ www.iupac.org/home/publications/e-resources/inchi.html". What are you searching? What are you searching? LimTox (text mining for toxicology). Thailand boasts some of the most popular. And luxurious resorts in Asia. 2015 - Spanish National Cancer Research Centre. CNIO Structural Biology and BioComputing Programme - LimTox DB.