comparative-legumes.org

Legume Information System

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Search sequenced legume genomes ». Search genes/proteins/gene families ». Advanced sequence search ». Species Access and Data. Information, resources, and datasets for many legume species. Leggle Gene Family Pages. Searchable gene families, alignments, and gene trees for the legumes and outgroup species. CViT Genome Search and Synteny Views. Chromosome- to gene-scale views of the. Gene → Function. Trait → Gene. Please not...

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Legume Information System | comparative-legumes.org Reviews

<META> DESCRIPTION

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Search sequenced legume genomes ». Search genes/proteins/gene families ». Advanced sequence search ». Species Access and Data. Information, resources, and datasets for many legume species. Leggle Gene Family Pages. Searchable gene families, alignments, and gene trees for the legumes and outgroup species. CViT Genome Search and Synteny Views. Chromosome- to gene-scale views of the. Gene → Function. Trait → Gene. Please not...

<META> KEYWORDS

1 register

2 news

3 search genes/proteins/gene families

4 advanced sequence search

5 maps

6 comparative map views

7 species

8 arachis hypogaea

9 cajanus cajan

10 chamaecrista fasciculata

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register,news,search genes/proteins/gene families,advanced sequence search,maps,comparative map views,species,arachis hypogaea,cajanus cajan,chamaecrista fasciculata,cicer arietinum,glycine max,lens culinaris,lotus japonicus,lupinus albus,medicago sativa

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Legume Information System | comparative-legumes.org Reviews

https://comparative-legumes.org

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Search sequenced legume genomes ». Search genes/proteins/gene families ». Advanced sequence search ». Species Access and Data. Information, resources, and datasets for many legume species. Leggle Gene Family Pages. Searchable gene families, alignments, and gene trees for the legumes and outgroup species. CViT Genome Search and Synteny Views. Chromosome- to gene-scale views of the. Gene → Function. Trait → Gene. Please not...

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cajca.comparative-legumes.org

Legume Information System :: Arachis hypogaea

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. A high-quality transcriptome assembly is available on these pages, at the Reference Data tab. Also see the LIS genome browser. For the pigeon pea 1.0 release. Has a moderate-sized diploid genome. The genotype “ICPL 87119” (also known as “Asha”) is being sequenced and assembled by the WGS approach (whole-genome shotgun) using short paired-end reads (Illumina). BAC library and clones. See linked document to order clones.

cvit.comparative-legumes.org

LIS :: Cvits

Seqqle search by sequence. CViT search by sequence. Leggle Gene Family Pages. Search for one or more of your sequences (using BLAST) against the soybean, Medicago, Cajanus or Lotus genomes. The results will be displayed using CViT (Chromosome Visualization Tool). Hits link out to genome browsers and other resources. Synteny will be shown between the "target genome" (the one you are searching against) and the "comparison genome". Loading. Please wait. Just under blast hits.

cicar.comparative-legumes.org

Legume Information System :: Arachis hypogaea

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Chickpea is a member of the galegoid (cool-season) legume clade. This annual grain legume crop is cultivated in both northern temperate regions (e.g. the north-west U.S. or south-central Canada), and in arid and semi-arid areas of the developing world. Chickpea is valuable as a highly versatile and nutritious pulse. See the LIS chickpea browser. Transcriptome assemblies and resources at the Cool Season Food Legume Database.

vigra.comparative-legumes.org

Legume Information System :: Arachis hypogaea

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Mungbean yellow mosaic India virus. Seedling rot pathogen, Rhizoctonia solani. Mungbean is diploid in nature with 2n=2x=22and a small genome size estimated to be 0.60 pg/1C (579 Mbp), which are similar to those of the other Vigna species (Somta and Srinives, 2007). 2n = 2x = 22. Read More ». Read More ». Chloroplast NCBI accession number. And the analysis of recombination across short mitochondrial repeats. Aluko RE. ...

vigun.comparative-legumes.org

Legume Information System :: Arachis hypogaea

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Cowpea is a member of the millettioid (warm-season legume) clade within the legume sub-family Papilionoideae. Due to its drought tolerance and ability to grow on poor quality soils, it is one of the most important food and forage legumes in the semi-arid tropics. Almost 80% of cowpea production takes place in the dry savannahs of tropical West and Central Africa. See map, synteny, and EST resources at HarvEST:cowpea.

vicfa.comparative-legumes.org

Legume Information System :: Arachis hypogaea

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. See fava research at KnowPulse. Current publications on Vicia faba. Díaz-Ruiz R, Torres AM, Satovic Z, Gutierrez MV, Cubero JI, Román B. Validation of QTLs for Orobanche crenata resistance in faba bean (Vicia faba L.) across environments and generations.

search.comparative-legumes.org

LIS Sequence Search

CDNA and Peptide Example. Cajanus cajan gene models. Cicer arietinum gene models. Glycine max gene models. Lotus japonicus gene models. Medicago truncatula v4 genome. Medicago truncatula v4 gene models. Medicago truncatula v3.5 genome. Medicago truncatula v3.5 gene models. Phaseolus vulgaris gene models. Gene family consensus seqs. Medicago truncatula v4.0 proteome. Medicago truncatula v3.5 proteome. Cajanus cajan gene models. Cicer arietinum gene models. Glycine max gene models.

INTERNAL PAGES

comparative-legumes.org

1

Legume Information System

http://www.comparative-legumes.org/pages/maps

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. The LIS Maps entry page. Allows quick navigation to any chromsome (linkage group) for any of the represented legume species, and to view comparisons of genetic maps from the selected species with the physical genome sequence of soybean,. For example, view the comparisons between the Phaseolus linkage groups and the soybean chromosomes.

2

Legume Information System

http://www.comparative-legumes.org/pages/species

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Members of the legume family, the Fabaceae or Leguminosae, fill critical niches in most terrestrial biomes. This is one of the few plant families whose species are capable of fixing nitrogen from the air, through association with specialized soil bacteria, for use as a natural fertilizer. The family has traditionally been divided into three subfamilies. The Caesalpinioideae.

3

Legume Information System

http://www.comparative-legumes.org/pages/collaborators

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. University of Saskatchewan). Development of lentil COS markers and transcriptome variant mining of 454-derived sequence data. University of Saskatchewan-funded. Syngenta). Analysis of soybean population level genetic diversity and the development of sequence-based bulk segregant analysis. Syngenta-funded. DuPont/Pioneer). Analysis of methylation-based genome subsampling in soybean. Pioneer-funded. University of Georgia)&#...

4

Legume Information System

http://www.comparative-legumes.org/pages/about

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. About the Legume Information System. The mission of LIS is to enable productive applied and basic research in the legumes by relating data from multiple crop and model species, and by helping researchers traverse among various data types. This classic site is in the process of transitioning to a new implementation based on GMOD components at legumeinfo.org. You may use the contact form. David Grant, Rex Nelson, Robert Bak...

5

Legume Information System

http://www.comparative-legumes.org/pages/genome_browsers

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Genome Browsers for the Reference Species. Genome browsers at LIS. And development partner SoyBase. There are several other genome browsers. Maintained in the community:. See the Gm GBrowse at Phytozome. And the genome browser at PlantGDB. The Lj GBrowse at Kazusa. Community has several genome browsers available: Mt GBrowse at JCVI. Based on builds 3.0 and 3.5.1, Mt Hapmap GBrowse. Based on build 3.0.

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phytoma.blogspot.com

EL BLOG DE PHYTOMA: EXPERTOS EN PREVENCIÓN DE INCENDIOS DE LA ETSEAMN RECOMIENDAN IMPULSAR EL EMPLEO RURAL PARA ACABAR CON LOS INCENDIOS

http://phytoma.blogspot.com/2015/07/expertos-en-prevencion-de-incendios-de.html

EL BLOG DE PHYTOMA. Viernes, 17 de julio de 2015. EXPERTOS EN PREVENCIÓN DE INCENDIOS DE LA ETSEAMN RECOMIENDAN IMPULSAR EL EMPLEO RURAL PARA ACABAR CON LOS INCENDIOS. El profesor José Andrés Torrent, de. Superior d’Enginyeria Agronòmica i del Medi Natural (ETSEAMN),. Considera que el fuego es el cáncer de los montes y que deben tomarse medidas urgentes para acabar con los incendios que cada año asolan los bosques de. José Andrés Torrent es profesor del. Grado de Ingeniería Forestal y del Medio Natural de.

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External Resources

http://mtweb1.cfans.umn.edu/resources/external

M truncatula de novo. National Science Foundation program to support basic research in plant genomics. 1001 Genomes (Arabidopsis Genetic Variation). Project to determine genetic variations in 1001 strains of Arabidopsis thaliana. Genome Project @ JCVI. Legume Information Service (LIS). USDA Resources for the legume research community. Medicago Handbook @ NOBLE foundation. A bioinformatics gateway towards integrative legume biology. Site hosted by: Nevin Young's Lab at University of Minnesota.

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Information Links

http://www.trifoliumnetwork.org/information_links/default.html

Global co-ordination of translational genomics in forage legumes. The sites listed below are useful sources of related information. AgResearch is one of New Zealand's leading research organisations. Our purpose is to enhance the value, productivity and profitability of New Zealand’s pastoral, agri-food and agri-technology sector value-chains to contribute to economic growth and beneficial environmental and social outcomes for New Zealand. Entre of Legumes in Mediterranean Agriculture. The Institute for A...

legumebase.org

Home | LIS - Legume Information System

http://www.legumebase.org/home

Skip to main content. LIS - Legume Information System. Information about legume traits for crop improvement. Gene search and basket (sets of genes). Publications (for data at LIS). A collaborative, community resource to facilitate crop improvement by integrating genetic, genomic, and trait data across legume species. ( Cite LIS. Search sequences and features in genome sequences. Adzuki bean (3.0). Red clover (2.1). Click for more about the Legume Information System (LIS) and sister projects . And at this...

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Legume Information System

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Search sequenced legume genomes ». Search genes/proteins/gene families ». Advanced sequence search ». Species Access and Data. Information, resources, and datasets for many legume species. Leggle Gene Family Pages. Searchable gene families, alignments, and gene trees for the legumes and outgroup species. CViT Genome Search and Synteny Views. Chromosome- to gene-scale views of the. Gene → Function. Trait → Gene. Please not...

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