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OGRe. DatabaseOGRe is an object relational database to store mitochondrial genomic information hosted at McMaster University.
http://drake.mcmaster.ca/
OGRe is an object relational database to store mitochondrial genomic information hosted at McMaster University.
http://drake.mcmaster.ca/
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OGRe. Database | drake.mcmaster.ca Reviews
https://drake.mcmaster.ca
OGRe is an object relational database to store mitochondrial genomic information hosted at McMaster University.
drake.mcmaster.ca
OGRe. gene orders
http://drake.mcmaster.ca/ogre/geneorders.shtml
Gene order information is stored as a string of gene names separated by commas, with a minus sign indicating a gene on the minus strand. For each species the gene string is stored with and without tRNA genes. Hence for Didelphis virginiana we have. COX1,-S,D,COX2,K,ATP8,ATP6,COX3,G,ND3,R,ND4L,ND4,H,S2,L,ND5,-ND6,-E,CYTB, T,-P,F,RNS,V,RNL,L2,ND1,I,-Q,M,ND2,-A,-C,W,-N,-Y. COX1,COX2,ATP8,ATP6,COX3,ND3,ND4L,ND4,ND5,-ND6,CYTB,RNS,RNL,ND1,ND2. Agamermis sp. BH-2006. Anomalurus sp. GP-2005. Arcos sp. KU-149.
OGRe.
http://drake.mcmaster.ca/ogre/about.shtml
Welcome to the Organellar Genome Retrieval system at McMaster University. OGRe is a searchable relational database which currently contains the complete mitochondrial genome sequences of 1244. In addition to gene sequences, OGRe also contains information on gene order and codon usage. To get started with OGRe, see the help.
OGRe. genome comparison
http://drake.mcmaster.ca/ogre/compare.shtml
Please select two genomes to compare; one from each drop down box. Agamermis sp. BH-2006. Anomalurus sp. GP-2005. Arcos sp. KU-149. Ascoschoengastia sp. TATW-1. Astrangia sp. JVK-2006. Asymmetron sp. A TK-2007. Bolitoglossa n. sp. RLM-2004. Bothropolys sp. SP-2004. Carassius auratus x Cyprinus carpio. Carassius auratus x Cyprinus carpio x Carassius cuvieri. Chondrilla aff. nucula CHOND. Discosoma sp. CASIZ 168915. Discosoma sp. CASIZ 168916. Elephantulus sp. VB001. Eutaeniophorus sp. 033-Miya. Vaceletia ...
OGRe. Taxonomy Browser
http://drake.mcmaster.ca/ogre/taxonomybrowser.shtml
Use the hyperlinked names to browse the available taxa and then click all desired boxes to select taxa for submission. Numbers in parentheses denote number of genomes available. Return to start conditions.
OGRe. gene alignments
http://drake.mcmaster.ca/ogre/alignments.shtml
Here are a selection of alignments of mitochondrial gene sequences. We hope to provide a more comprehensive set soon. Please select the group of organisms you wish to download alignments for from the list below:.
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OGRe. Database
Welcome to the Organellar Genome Retrieval system at McMaster University. OGRe is a searchable relational database which currently contains the complete mitochondrial genome sequences of 1244. In addition to gene sequences, OGRe also contains information on gene order and codon usage. To get started with OGRe, see the help.
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