process.knowledgeblog.org
Uncategorized | The Knowledgeblog Process
http://process.knowledgeblog.org/category/uncategorized
A knowledgeblog how-to knowledgeblog. Posts In Category Uncategorized. Proxying Pingbacks and Trackbacks. On July 26, 2011 by Simon Cockell in Uncategorized. Introduction Trackbacks and Pingbacks are both implementations of the linkback methodology for providing links between digital resources and things which hyperlink to those digital resources. This paradigm is most []. Please cite this resource as: The Knowledgeblog Process http:/ process.knowledgeblog.org. Download resource as: [bib].
taverna.knowledgeblog.org
Identification of differentially-expressed genes from microarray data | The Taverna Knowledge Blog
http://taverna.knowledgeblog.org/2011/02/06/identification-of-differentially-expressed-genes-from-microarray-data
The Taverna Knowledge Blog. Designing, Executing and Sharing Scientific workflows. On February 6, 2011 by Peter Li in Case Studies. Identification of differentially-expressed genes from microarray data. Microarray data analysis workflow. The purpose of this workflow. Web service access to maxdBrowse. Use of Beanshell scripts for reconciling mismatches in data interoperability between services and implementing user interaction during workflow execution. Albeit basic, form of user interaction can also be i...
process.knowledgeblog.org
Process | The Knowledgeblog Process
http://process.knowledgeblog.org/category/all/process
A knowledgeblog how-to knowledgeblog. Posts In Category Process. Use of DOIs on Knowledgeblogs. On July 26, 2011 by Simon Cockell in Development. The Knowledgeblog project registers Digital Object Identifiers (DOIs) for posts using the Datacite service, in which the British Library is a partner. Datacite has an Application Programming Interface (API) which can []. Knowledgeblog types and peer-review levels. On August 10, 2010 by Simon Cockell, Daniel Swan and Phillip Lord in Process.
process.knowledgeblog.org
How To | The Knowledgeblog Process
http://process.knowledgeblog.org/category/all/how-to
A knowledgeblog how-to knowledgeblog. Posts In Category How To. On September 7, 2012 by Phillip Lord in greycite. Greycite is a tool which extracts bibliographic metadata from a web page. It stores this metadata, and then makes it available for either computational use by tools such as []. Changing the Container Title. On August 23, 2012 by Phillip Lord in How To. Adding Multiple Authors to a Post. On August 22, 2012 by Phillip Lord in How To. Citing URLs with Kcite. The Kblog-metadata plugin (http:/ kno...
taverna.knowledgeblog.org
2010 December | The Taverna Knowledge Blog
http://taverna.knowledgeblog.org/2010/12
The Taverna Knowledge Blog. Designing, Executing and Sharing Scientific workflows. Archive For December 2010. On December 13, 2010 by Alan Williams in Features of Taverna. R is a commonly used language and environment for statistical calculation. R is free and opensource. A large amount of documentation on R is available online including the user []. On by Stian Soiland-Reyes in Features of Taverna. On by Stian Soiland-Reyes in Features of Taverna. On by Marco Roos in Case Studies. Beanshell is a Java sc...
bioinformatics.knowledgeblog.org
Kinetic modelling of metabolic pathways | The Bioinformatics Knowledgeblog
http://bioinformatics.knowledgeblog.org/2011/06/21/kinetic-modelling-of-metabolic-pathways
A bioinformatics tutorial resource. On June 21, 2011 by Natalie Stanford and Kieran Smallbone in Metabolic modelling. Kinetic modelling of metabolic pathways. 1 Integrative Systems Biology Doctoral Training Centre; 2. Manchester Centre for Integrative Systems Biology; and 3. School of Mathematics, University of Manchester, M13 9PL, UK. Is the stoichiometric matrix, which may be derived from the topology of the model. Must be defined, though note that only concentrations. Will change over time. Finally,.
bioinformatics.knowledgeblog.org
A Survey of Metabolic Reconstruction Tools for Metagenomic Datasets | The Bioinformatics Knowledgeblog
http://bioinformatics.knowledgeblog.org/2011/06/21/a-survey-of-metabolic-reconstruction-tools-for-metagenomic-datasets
A bioinformatics tutorial resource. On June 21, 2011 by Matt Collison in Software Comparisons. A Survey of Metabolic Reconstruction Tools for Metagenomic Datasets. Matthew G. collison. Biopharmaceutical Bioprocess Technology Centre, Merz Court, Newcatle University, NE1 7RU. There are 2 major subdivisions in metagenomics metabolic reconstruction software packages; visualisation tools with light-weight analysis features aiming to aid manual curation of the resulting pathways, and heavy-weight analysis tool...
bioinformatics.knowledgeblog.org
Desktop Sequence Analysis: software review | The Bioinformatics Knowledgeblog
http://bioinformatics.knowledgeblog.org/2011/06/21/desktop-sequence-analysis-software-review
A bioinformatics tutorial resource. On June 21, 2011 by Alastair Kerr in Software Comparisons. Desktop Sequence Analysis: software review. Shaun Webb, Alastair RW Kerr. Affiliation of Authors: Wellcome trust Centre for Cell Biology, University of. Vector NTI – sequence creation, mapping, analysis, annotation, illustration and management. AlignX – multiple sequence alignment of proteins and DNAs. ContigExpress – DNA sequence assembly. BioAnnotator – functional annotation of proteins and DNAs. Due to the c...
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