mar2016.archive.ensembl.org

Ensembl genome browser 84

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. Please use the cache. All web upd...

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Ensembl genome browser 84 | mar2016.archive.ensembl.org Reviews

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Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. Please use the cache. All web upd...

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Ensembl genome browser 84 | mar2016.archive.ensembl.org Reviews

https://mar2016.archive.ensembl.org

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. Please use the cache. All web upd...

INTERNAL PAGES

mar2016.archive.ensembl.org

1

Downloads - Ensembl genome browser 84

http://mar2016.archive.ensembl.org/downloads.html

Download a sequence or region. Click on the 'Export data' button in the lefthand menu of most pages to export:. GTF or GFF features. Custom datasets can be retrieved using the BioMart data-mining tool. You may find exploring this web-based query tool easier than extracting information direct from our databases. Write your own Perl scripts to retrieve small-to-medium datasets. All our data, as well as added functionality, is available through the Ensembl Perl API. You can also use our REST API.

2

Gene Expression

http://mar2016.archive.ensembl.org/info/website/tutorials/expression.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. The GRCh37 assembly in Ensembl. Use my own data. Gene expression in Ensembl. RNASeq gene models, intron-spanning and original reads are available on the Location tab. For many of our species. View the models alongside the genome, or compare with a gene of interest:. Learn how RNASeq evidence was used to create the gene models:. Use the configuration panel. To turn on RNASeq data:. Help on the Region in Detail page.

3

Variants for my gene

http://mar2016.archive.ensembl.org/info/website/tutorials/gene_snps.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. The GRCh37 assembly in Ensembl. Use my own data. Variants for my gene. SNPs and other variants for my gene. Find short variants for a gene from dbSNP, COSMIC, and other sources. In the Gene Variation table. Variants are grouped into consequence types. Click on 'Show' to reveal a table of variant IDs. For a specific consequence type. Gene Variation Table help page. View variants within the nucleotide sequence in the Gene Sequence.

4

Help & Documentation

http://mar2016.archive.ensembl.org/info

Browse News by Topic. What's New in this release. Exporting data via website. DAS (Distributed Annotation System). About the Ensembl Project. Credits for species images. Our website offers lots of ways to view and interact with our genomic data - find out more! The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. All of our data is open-access and can be downloaded free of charge ( disclaimer. For direct data access.

5

Adding Custom Tracks

http://mar2016.archive.ensembl.org/info/website/upload

Pairwise Interactions File Formats. Coordinate Systems for custom tracks. How to add custom tracks. Data access and security. Adding Custom Tracks to Ensembl. How to add custom tracks. How to add track hubs. Data access and security. How to add custom tracks. You can add a track from any species-specific page, such as Region in Detail. The track will automatically display in the view in which you have added it. You can also display an uploaded track in other views like Region Overview. Or Manage your data.

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grch37.ensembl.org

Help - Homo sapiens - GRCh37 Archive browser 86

http://grch37.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

asia.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://asia.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

mar2015.archive.ensembl.org

Ensembl genome browser 79: Homo sapiens - - Help

http://mar2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

jul2015.archive.ensembl.org

Ensembl genome browser 81: Homo sapiens - - Help

http://jul2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014.

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Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. ENCODE data in Ensembl. In your o...

mar2016.archive.ensembl.org

Ensembl genome browser 84

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. Please use the cache. All web upd...

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