cosmos-fp7.eu
The University Of Manchester | http://cosmos-fp7.eu
http://www.cosmos-fp7.eu/manchester
Universiteit Leiden - NMC. Max Planck Institute - MPIMP. The University Of Manchester. Leibniz-Institute of Plant Biochemistry. The University Of Birmingham. The University of Oxford. Work packages use cases. WP2 - Standards Development. WP3 - Database Management System. WP4 - Data Deposition. WP5 - Dissemination Pipelines. WP6 - Coordination with BioMedBridges and biomedical ESFRI infrastructures. WP7 - Outreach and Training. Opensource software for reading and writing mzML. NmrML meeting in Florence.
ondex.org
Ondex - data integration and visualisation
http://www.ondex.org/ack.shtml
Documentation and sample graphs. The Ondex SABR Project. Edgar Wingender (geneXplain and University Medical Center Goettingen). Charlie Hodgman (University of Nottingham, CPIB). Igor Goryanin (University of Edinburgh, CSBE). Jacob Kohler ( Dow AgroSciences. Philippe Sanseau ( GSK. Ralf Hofestadt (University of Bielefeld). The Ondex SABR project is funded by BBSRC Grants BBS/B/13640 and BB/F006039/1. Department of Computational and Systems Biology ( CSYS. Centre for Bioenergy and Climate Change ( BCC.
comp-sys-bio.org
Mendes Research Group - News
http://www.comp-sys-bio.org/news.html
Professor Pedro Mendes Computational Systems Biology. Pedro Mendes joins University of Connecticut as full-time faculty from July 1st. New chapter in our group. Posted on: May 16, 2016. Our group is organizing a COPASI Conference, May 12-13, 2016. 2016 Computational Modelling with COPASI. Posted on: Feb 18, 2016. New paper on network effect of kinetic isotope effects. We investigate kinetic isotope effects at the systems level. Posted on: Oct 23, 2015. Postdoc position to work on COPASI in Manchester, UK.
comp-sys-bio.org
CMSB 2014
http://www.comp-sys-bio.org/CMSB14/paper18.html
CMSB 2014 17-19 November MIB University of Manchester, UK. Trace Simplifications Preserving Temporal Logic Formulae: Application to Oscillation Constraints between the Circadian Clock and the Cell Cycle. 1 - Inria Paris-Rocquencourt, Team Lifeware, France. Winner of Best Student Paper Prize. Back to accepted papers. Is licensed under a Creative Commons Attribution 4.0 International License. This page uses the Perfect 'Left Menu' 2 Column Liquid Layout.
comp-sys-bio.org
Yeast consensus metabolic network
http://www.comp-sys-bio.org/yeastnet
Reconstruction of yeast metabolism. Entire network in SBML. Entire network in SBML, no compartments. Introduction and SBML files. Version 1 from Nature Biotechnol. paper:. Introduction and SBML files. Version 3 of this reconstruction was released in November 2009, and consists of 2830 reactions. Including 2705 metabolic reactions) and 3057 chemical species. As usual, the entire network is supplied in a single SBML file and is also available as a searchable database. You can access that network here.
u003f.wordpress.com
Unfinished Business #4: modelling β-oxidation | U+003F
https://u003f.wordpress.com/2015/03/31/unfinished-business-4-modelling-β-oxidation
A blog about Science. Unfinished Business #4: modelling β-oxidation. I have a long-running. Collaboration with Bernard Corfe. Modelling metabolism of dietary fibres in the gut. These otherwise indigestible carbohydrates are first fermented by bacteria in the colon to form short-chain fatty acids. The fatty acids are then taken up by colonocytes, and processed in their mitochondria using β-oxidation. But, for those not fortunate enough to have a 6.4M grant. You can grab an SBML. Diabetic neuropathy →.
biomodels.caltech.edu
BioModels Database (Caltech mirror)
http://biomodels.caltech.edu/acknowledgements
BioModels Database is developed by the BioModels.net team. Part of the PST. UK), the Le Novère lab. UK) and the SBML Team. BioModels Database is supported by the European Molecular Biology Laboratory. The Biotechnology and Biological Sciences Research Council. The Innovative Medicines Initiative. And the Seventh Framework Programme. BioModels Database also benefited from the help of the National Institute of General Medical Sciences. USA), the Sauro Lab. Tokyo, JP), and from funds of the DARPA.
systembiology.net
This is the website of European Systems Biology:
http://www.systembiology.net/vacancies/index.html
Some vacancies in Systems Biology:. Center for Integrative Systems Biology ( MCISB. 2 postdoctoral fellows to work on hierarchical regulation analysis (what is regulated by translation, what by transcription, what by metabolism etc.) ( information. Lecturer experimental systems Biology with a focus on mammalian signal transduction ( enquire. Part time Professor Systems Biology ( enquire. 10 Ph D studentships. Per year (fellowship plus training fee plus PC provided; starting October 1).
sulfosys.com
Sulfolobus Systems Biology - Partner & Funding
http://www.sulfosys.com/partner-funding.html
Skip to service navigation. Sonja V. Albers. Arnold J.M. Driessen. John Van der Oost. Hans V. Westerhoff www.bio.vu.nl. And www.mcisb.org. Philip C. Wright. Systems Biology of Microorganisms. Skip to the top of the page.
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