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morrislab.med.utoronto.ca

Morris Lab | Homepage

Morris Lab uses machine learning and statistical modeling to help decode the. Human genome. Currently, we are focused on two core research areas:. Deciphering the regulatory code for gene expression and predicting the. Biological function of genes and proteins. We work in close collaboration with. Experimental biologists to generate in vitro and in vivo data that we use to fit. Our models as well as to test and refine our in silico predictions. MRNA elements that influence mRNA expression, localization,.

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Morris Lab | Homepage | morrislab.med.utoronto.ca Reviews
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Morris Lab uses machine learning and statistical modeling to help decode the. Human genome. Currently, we are focused on two core research areas:. Deciphering the regulatory code for gene expression and predicting the. Biological function of genes and proteins. We work in close collaboration with. Experimental biologists to generate in vitro and in vivo data that we use to fit. Our models as well as to test and refine our in silico predictions. MRNA elements that influence mRNA expression, localization,.
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4 software
5 data
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7 stability and splicing
8 genemania prediction server
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Morris Lab | Homepage | morrislab.med.utoronto.ca Reviews

https://morrislab.med.utoronto.ca

Morris Lab uses machine learning and statistical modeling to help decode the. Human genome. Currently, we are focused on two core research areas:. Deciphering the regulatory code for gene expression and predicting the. Biological function of genes and proteins. We work in close collaboration with. Experimental biologists to generate in vitro and in vivo data that we use to fit. Our models as well as to test and refine our in silico predictions. MRNA elements that influence mRNA expression, localization,.

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morrislab.med.utoronto.ca morrislab.med.utoronto.ca
1

Morris Lab | Projects

http://morrislab.med.utoronto.ca/projects.html

Human MicroRNA Target Prediction. Fast and Accurate Gene Function Prediction. Motif Models for RNA Binding Proteins. Gene Expression Based Prognostic Models For Predicting Patient Outcome In Lung Cancer. Identifying Genes Important In Juvenile Arthritis Development And Progression. Modeling Population Dynamics Of Hematopoietic Stem Cell Systems. ISOLATE: Finding The Site Of Origin Of Carcinomas Of Unknown Origin. Human MicroRNA Target Prediction. Fast and Accurate Gene Function Prediction. Motif Models f...

2

Morris Lab | events

http://morrislab.med.utoronto.ca/events.html

3

Morris Lab | Software

http://morrislab.med.utoronto.ca/software.html

This is the software pertaining to the publication. Xiaoyu Chen, Timothy R. Hughes and Quaid Morris (2007). RankMotif : a motif-search algorithm that. Accounts for relative ranks of K-mers in binding transcription factors. It should compile and run on any distribution of Linux. The g compiler for C is required. See. README.txt for detailed usage instructions. Download RankMotif (source code) (TAR.GZ, 1.7MB). Download RankMotif (binary for Linux x86 64) (TAR.GZ, 645KB). Removing expression variation due t...

4

Morris Lab | Contact Us

http://morrislab.med.utoronto.ca/data.html

Mostafavi and Morris. (Bioinformatics 2010). Fast Integration of Heterogeneous Data Sources for Predicting Gene Function with Limited Annotation. Li et al. (RNA 2010). Target Site Accessibility Predicts in vivo Binding of RNA-binding Proteins. Quon and Morris. (Bioinformatics 2009). ISOLATE: A computational strategy for identifying the primary origin of cancers using high throughput sequencing. Mostafavi et al. (Genome Biology 2008).

5

Morris Lab | Publications

http://morrislab.med.utoronto.ca/publications.html

Bader GD. Cytoscape Web: an interactive web-based network browser. Bioinformatics. 2010;26(18): 2347-2348. [pdf]. Ray D, Chan ET, Hughes TR, Morris Q. RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins. PLoS Comput Biol. 2010 Jul 1;6:e1000832. [pdf]. Grouios C, Kazi F. Bader GD, Morris Q. The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function. Lipshitz HD, Morris Q. Hughes TR. Rapid...

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learning.cs.toronto.edu learning.cs.toronto.edu

UofT Machine Learning | People

http://learning.cs.toronto.edu/people

Eddie K.H. Ng. Matthew J. Beal. Miguel A. Carreira-Perpinan.

tdccbr.med.utoronto.ca tdccbr.med.utoronto.ca

Faculty Members | Donnelly Centre for Cellular and Biomolecular Research

http://tdccbr.med.utoronto.ca/faculty/directors_welcome.html

Skip to main content. U of T Main. Friesen, D. James (Emeritus Faculty). Roth, Frederick (Fritz). Van der Kooy, Derek. Centre for Commercialization of Regenerative Medicine. Centre for Commercialization of Antibodies and Biologics. Toronto Recombinant Antibody Centre. Donnelly-Princess Margaret Screening Centre. Cecil Yip Doctoral Research Award. Jennifer Dorrington Graduate Research Award. Donnelly Centre Research Thesis Prize. Donnelly Centre Graduate Student Association. Charles H. Best Fellows. Funct...

baderlab.net baderlab.net

Software - Bader Lab @ The University of Toronto

http://www.baderlab.net/Software

Last updated at 2016-07-13 21:15:34. The Bader Lab is involved in a number of collaborative open-source bioinformatics projects designed to make biological pathway data easy to visualize and analyze. Biological Network Analysis and Visualization Software. Biological Pathway and Network Database Software. Pathway and Network Data. The Cancer Cell Map. Pathway Data Exchange Standards. Biological Network Analysis and Visualization Software. Cytoscape is a bioinformatics software platform for visualizing mol...

thedonnellycentre.utoronto.ca thedonnellycentre.utoronto.ca

Faculty Members | Donnelly Centre for Cellular and Biomolecular Research

http://thedonnellycentre.utoronto.ca/faculty/directors_welcome.html

Skip to main content. U of T Main. Friesen, D. James (Emeritus Faculty). Roth, Frederick (Fritz). Van der Kooy, Derek. Centre for Commercialization of Regenerative Medicine. Centre for Commercialization of Antibodies and Biologics. Toronto Recombinant Antibody Centre. Donnelly-Princess Margaret Screening Centre. Cecil Yip Doctoral Research Award. Jennifer Dorrington Graduate Research Award. Donnelly Centre Research Thesis Prize. Donnelly Centre Graduate Student Association. Charles H. Best Fellows. Funct...

baderlab.com baderlab.com

Software - Bader Lab @ The University of Toronto

http://www.baderlab.com/Software

Last updated at 2016-07-13 21:15:34. The Bader Lab is involved in a number of collaborative open-source bioinformatics projects designed to make biological pathway data easy to visualize and analyze. Biological Network Analysis and Visualization Software. Biological Pathway and Network Database Software. Pathway and Network Data. The Cancer Cell Map. Pathway Data Exchange Standards. Biological Network Analysis and Visualization Software. Cytoscape is a bioinformatics software platform for visualizing mol...

ccbr.utoronto.ca ccbr.utoronto.ca

Faculty Members | Donnelly Centre for Cellular and Biomolecular Research

http://ccbr.utoronto.ca/faculty/directors_welcome.html

Skip to main content. U of T Main. Friesen, D. James (Emeritus Faculty). Roth, Frederick (Fritz). Van der Kooy, Derek. Centre for Commercialization of Regenerative Medicine. Centre for Commercialization of Antibodies and Biologics. Toronto Recombinant Antibody Centre. Donnelly-Princess Margaret Screening Centre. Cecil Yip Doctoral Research Award. Jennifer Dorrington Graduate Research Award. Donnelly Centre Research Thesis Prize. Donnelly Centre Graduate Student Association. Charles H. Best Fellows. Funct...

baderlab.org baderlab.org

Software - Bader Lab @ The University of Toronto

http://www.baderlab.org/Software

Last updated at 2016-07-13 21:15:34. The Bader Lab is involved in a number of collaborative open-source bioinformatics projects designed to make biological pathway data easy to visualize and analyze. Biological Network Analysis and Visualization Software. Biological Pathway and Network Database Software. Pathway and Network Data. The Cancer Cell Map. Pathway Data Exchange Standards. Biological Network Analysis and Visualization Software. Cytoscape is a bioinformatics software platform for visualizing mol...

cytoscapeweb.cytoscape.org cytoscapeweb.cytoscape.org

Cytoscape Web » About » Cytoscape Web

http://cytoscapeweb.cytoscape.org/about

This project has been replaced by Cytoscape.js. And is no longer active. Cytoscape Web was initially developed at the University of Toronto. In the Donnelly Centre for Cellular and Biomolecular Research. In the labs of Gary Bader. Cytoscape Web development was originally funded by Genome Canada. Through the Ontario Genomics Institute. 2007-OGI-TD-05). It is now actively developed as part of the Cytoscape. Project which is funded by grants from the U.S. National Institutes of Health (NIH). And JavaScript)...

bioinformatics.ca bioinformatics.ca

Faculty | Bioinformatics.ca

https://bioinformatics.ca/workshops/faculty

Skip to Main Content Area. Jobs Alert Mailing List. Bioinformatics Experts in Canada. Bioinformatics Activities in Canada and Worldwide. Education Programs and Courses in Canada. Username or e-mail: *. Bioinformatics specialist and Web Database Developer. Postdoctoral Fellowship in Bioinformatics. Post-Doctoral fellow in High Dimensional Flow Cytometry Bioinformatics. August 19, 2016 -. Bioinformatics.ca has a new YouTube Channel featuring workshop recordings. April 8, 2016 -. March 31, 2016 -. David wor...

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As an Independant Insurance Agency Morris Insurance Agency Inc. has the customer in mind. We believe that everyone should have the coverage they deserve to protect thier lifestyle. We have relationships with dozens of insurance companies for the products that are right for you. Our team of Agents can get you the coverage you need to sleep better at night at the right price. Call us today or simply click the Contact Us. Tab and an agent will call or email you. Morris Insurance Agency, Inc. 8 am to 5 pm.

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The Neural Representations Lab. Faculty of Natural Sciences. Sagol Department of Neurobiology.

morrislab.med.utoronto.ca morrislab.med.utoronto.ca

Morris Lab | Homepage

Morris Lab uses machine learning and statistical modeling to help decode the. Human genome. Currently, we are focused on two core research areas:. Deciphering the regulatory code for gene expression and predicting the. Biological function of genes and proteins. We work in close collaboration with. Experimental biologists to generate in vitro and in vivo data that we use to fit. Our models as well as to test and refine our in silico predictions. MRNA elements that influence mRNA expression, localization,.

morrislab.ocean.washington.edu morrislab.ocean.washington.edu

Center for Environmental Genomics | Morris Lab

UW oceanographers grow, sequence genome of ocean microbe important to climate change. Center for Environmental Genomics. Currently Funded Research Projects. Characterizing the contribution of bacteria from the SUP05 clade to autotrophic and heterotrophic carbon cycling across ocean gradients. Previously Funded Research Projects. Mechanisms of carbon assimilation and sulfur oxidation in the genus Thioglobus. Characterizing biological function across a persistent oceanographic "hotspot". Log in using OpenID.

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Morris Lab

Maina et al. Population genomics of sorghum (Sorghum bicolor) across diverse agroclimatic zones of Niger. Akata et al. Combining ability and heterotic pattern in West African sorghum landraces. African Crop Sci J. Marla et al. Comparative transcriptome and lipidome analyses reveal molecular chilling responses in chilling-tolerant sorghums. Bouchet et al. Increased Power To Dissect Adaptive Traits in Global Sorghum Diversity Using a Nested Association Mapping Population. Assistant Professor in Agronomy.

morrislab.wustl.edu morrislab.wustl.edu

Samantha Morris Lab

Welcome to the Morris Lab. The Morris Lab is a stem cell and developmental biology laboratory based in the Departments of Genetics, and Developmental Biology at Washington University in St. Louis, USA. Our research focuses on dissecting the gene regulatory networks that define cell fate. We apply this knowledge to engineer clinically relevant cell types. Manipulating gene regulatory networks to generate clinically relevant cell types. Embryonic development as a blueprint for guiding cell fate. Niche, tra...

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