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ODB3 - Operon Database

TEST SITE OF ODB3.

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ODB3 - Operon Database | operondb.jp Reviews
<META>
DESCRIPTION
TEST SITE OF ODB3.
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1 operon database v3
2 known
3 conserved
4 reference
5 welcome to odb
6 statistics of odb
7 number of operons
8 number of genes
9 number of genomes
10 known operon
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operon database v3,known,conserved,reference,welcome to odb,statistics of odb,number of operons,number of genes,number of genomes,known operon,conserved operon,reference operon,previous release,shujiro okuda laboratory
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ODB3 - Operon Database | operondb.jp Reviews

https://operondb.jp

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ODB: index

http://www.operondb.jp/odb2

Okuda, S. and Yoshizawa, A.C. ODB: a database for operon organizations, 2011 update. Nucleic Acids Res.39(Database issue):D552-555 (2011). [ pubmed. Okuda S, Katayama T, Kawashima S, Goto S, and Kanehisa M. ODB: a database of operons accumulating known operons across multiple genomes. Nucleic Acids Res. 34(Database issue):D358-362 (2006).[ pubmed. ODB version 1 is here.

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genome.jp genome.jp

GenomeNet - Community Databases

http://www.genome.jp/en/gn_orfdb.html

The Kyoto University Bioinformatics Center has been in collaboration with groups of experimental laboratories for the development and maintenance of the following community databases. Cyanobacteria Gene Annotation Database. Bacillus subtilis Genome Database. Microarray Gene Expression Profile Database. Members of the Kyoto University Bioinformatics Center have developed the following databases as part of their research activities. Amino Acid Index Database. Kawashima et al. (2008). Okuda et al. (2006).

en.wikipedia.org en.wikipedia.org

Operon - Wikipedia, the free encyclopedia

https://en.wikipedia.org/wiki/Operon

From Wikipedia, the free encyclopedia. Not to be confused with Opteron. Is a functioning unit of genomic DNA containing a cluster of genes. Under the control of a single promoter. The genes are transcribed. Together into an mRNA. Strand and either translated. Together in the cytoplasm, or undergo trans-splicing. Together or not at all. Several genes must be co-transcribed. To define an operon. Originally, operons were thought to exist solely in prokaryotes. In the early 1990s,. For example, T7 phages.

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The method is modified from the one described in: Maria D. Ermolaeva, Owen White and Steven L. Salzberg. Prediction of Operons in Microbial Genomes. Nucleic Acids Research, 29, 1216-1221, (2001). Mihaela Pertea, Kunmi Ayanbule, Megan Smedinghoff and Steven L. Salzberg. OperonDB: a comprehensive database of predicted operons in microbial genomes. Nucleic Acids Research, doi:10.1093/nar/gkn784 (2008). Last update of OperonDB: October 2015. 1700 new bacterial and archaeal genomes added! 111;perondb.

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ODB3 - Operon Database

Dynamically predictable by parameters. Okuda, S. and Yoshizawa, A.C. ODB: a database for operon organizations, 2011 update. Nucleic Acids Res.39(Database issue):D552-555 (2011). [ pubmed. Okuda S, Katayama T, Kawashima S, Goto S, and Kanehisa M. ODB: a database of operons accumulating known operons across multiple genomes. Nucleic Acids Res. 34(Database issue):D358-362 (2006).[ pubmed. ODB version 2 is here.

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