pymolwiki.org

PyMOLWiki

Welcome to the PyMOL Wiki! The community-run support site for the PyMOL. New accounts: email jason (dot) vertrees (@) gmail dot com. PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released. On December 3, 2014. Is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http:/ pymol.org/fellowship. PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released. On August 4, 2014.

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Welcome to the PyMOL Wiki! The community-run support site for the PyMOL. New accounts: email jason (dot) vertrees (@) gmail dot com. PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released. On December 3, 2014. Is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http:/ pymol.org/fellowship. PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released. On August 4, 2014.

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PyMOLWiki | pymolwiki.org Reviews

https://pymolwiki.org

Welcome to the PyMOL Wiki! The community-run support site for the PyMOL. New accounts: email jason (dot) vertrees (@) gmail dot com. PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released. On December 3, 2014. Is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http:/ pymol.org/fellowship. PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released. On August 4, 2014.

INTERNAL PAGES

pymolwiki.org

1

Cgo arrow - PyMOLWiki

http://www.pymolwiki.org/index.php/Cgo_arrow

This code has been put under version control in the project Pymol-script-repo. This script will draw a CGO arrow between two picked atoms. Cgo arrow [ atom1 [, atom2 [, radius [, gap [, hlength [, hradius [, color [, name ] ] ] ]. Retrieved from " http:/ pymolwiki.org/index.php? This page was last modified on 23 April 2013, at 09:58. Content is available under GNU Free Documentation License 1.2.

2

Bondpack - PyMOLWiki

http://www.pymolwiki.org/index.php/Bondpack

GNU GENERAL PUBLIC LICENSE. A collection of PyMOL plugins to visualize atomic bonds. PyMOL is without any doubt a great tool to visualize protein and ligand molecules. However, drawing interactions between atoms can be often quite cumbersome when done manually. For the sake of convenience, I developed three plugins for PyMOL that will make our life as protein biologists a little bit easier. The underlying function is based on the different atom types, such as hydrogen bond acceptor and donor atoms,.

3

TOPTOC - PyMOLWiki

http://www.pymolwiki.org/index.php/TOPTOC

See Also: Old Table of Contents. Warning: This page is new and needs more updating. Installation, Configuration and Learning. Launching From a Script. Commands, Representations and Settings. Modeling and editing structures. Extending, Embedding and Scripting. Electrostatics and energy minimization. Tutorial on writing plugins. Working with Structure Families. NMR Restraints and Analysis. Nuccyl is a great PyMol extension. Binding and Active site prediction.

4

Cheshift - PyMOLWiki

http://www.pymolwiki.org/index.php/Cheshift

Https:/ github.com/aloctavodia/cheshift/archive/v3.6.zip. Using the Plugin for predicting. Using the Plugin for protein structure validation. Result of a CheShift analysis. Colors indicate the difference between predicted and observed. Chemical shifts values averaged over all uploaded conformers. Green, yellow and red colors represent small, medium and large differences, respectively. White is used if either the prediction failed or the observed value is missing. 3) You should install NumPy and SciPy&#46...

5

Ray - PyMOLWiki

http://www.pymolwiki.org/index.php/Ray

Creates a ray-traced image of the current frame. Varying settings to play with rendering options. High Quality B&W Rendering. Ray Tracing Stereo Images. This command is used to make high-resolution photos fit for publication and formal movies. Please note, the ray. Command can take some time (up to several minutes, depending on image complexity and size). For those who are making movies with PyMOL, Ray. Or screen is smaller than the requested output file dimensions. Image, not ray traced. Variable in PyM...

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female-fizzicist.blogspot.com

Female Fizzicist: Shedding Light

http://female-fizzicist.blogspot.com/2006/10/shedding-light.html

A female physics graduate enroute to earning a PhD degree in biophysics (see csb.stanford.edu/ adelene/). She's passionate about science and education, and would like to integrate both. Loves reading (these days wastes away more in front of the TV), and ocassionally posts information based on what she finds in the world out there. Saturday, October 14, 2006. Or you can download here. If that link does work (I have problems accessing it). You can easily find tools to help you out at PyMolWiki. Oh dear, en...

ch253.wordpress.com

Advanced Biochemistry-AdMU-NRLR | Just another WordPress.com weblog | Page 2

https://ch253.wordpress.com/page/2

February 21, 2015, Sa: Signal transduction. Cell signaling and the beta-adrenergic receptor. See list of papers under Feb. 14. Introductory lecture to signaling. The backstory: reading between the lines of Brian Kobilka’s Nobel lecture (2012) and the timeline and the author lists for the different papers. February 25, 2015 at 9:56 am. 14 February 2015: Gene knockdown and knockout technologies. RNA interference: https:/ www.youtube.com/watch? Gene knockdowns and phenocopies. Please write a summary as usua...

sgdd.blogspot.com

Structure Guided Drug Discovery: PyMol: A beautiful open-source software for molecular visualization

http://sgdd.blogspot.com/2005/08/pymol-beautiful-open-source-software.html

Structure Guided Drug Discovery. SGDD: Recipes, Ideas and Links. PyMol: A beautiful open-source software for molecular visualization. Present version is 0.98. I love this software and have been a happy (power)user of this software since 2003. PyMol is here to grow. A free and open-source molecular graphics system for visualization, animation, editing, and publication-quality imagery. PyMOL is scriptable and can be extended using the Python language. Supports Windows, Mac OSX, Unix, and Linux.

blanfordgroup.com

Links :: Blanford group

http://www.blanfordgroup.com/links.html

Manchester Institute of Biotechnology. Tel: 44 (0)161 306 8915. Fax: 44 (0)161 306 5201. NIST’s set of thermochemical data, spectra, reactions, and more. Fundamental physical constants from NIST. Windows-based mathematical modelling software for electron-transfer kinetics of electrode-bound species. A professional networking site for materials scientists. They’re fungi . in space! Where to download, deposit and explore protein structures derived from X-ray and NMR analysis.

mertzlab-biophysics.com

Links - the Mertz Group

http://www.mertzlab-biophysics.com/links.html

Fairmont State (Erica Harvey and Co.) collaboration. Dave Young's chemical topics. Chemistry Research Laboratory Room 463. The C Eugene Bennett Department of Chemistry. Morgantown, WV 26506. Create a free website. Create your own free website. Start your own free website. A surprisingly easy drag and drop site creator. Learn more.

kpwu.wordpress.com

Morphing movie using RigiMOL/PyMOL | My software notes

https://kpwu.wordpress.com/2013/04/06/morphing-movie-using-rigimolpymol

April 6, 2013. Morphing movie using RigiMOL/PyMOL. Filed under: pymol/ molmol. 8212; kpwu @ 2:14 am. RigiMOL is a feature only available in incentive PyMOL, not in open source built PyMOL. The following two short (very short) youtube videos are made by the example script provided at PyMOLWiki. Script link at here. The demo script is also pasted at here:. Get open and closed conformation of adenylate kinase. Fetch 1ake 4ake, async=0. Make two state object. Create rin, 1ake and aln, 1, 1. Morphing movie us...

pymol.org

Warren L. DeLano Memorial PyMOL Open-Source Fellowship | www.pymol.org

http://pymol.org/fellowship

A molecular visualization system on. And distributed by Schrödinger. Warren L. DeLano Memorial PyMOL Open-Source Fellowship. Fellows perform their proposed tasks and submit written progress summaries every quarter. Schrödinger reviews the fellow's progress and, upon a positive review, the fellow is given a stipend of $2000 USD. Thus, each successful fellow receives a total stipend of $8000 USD per year. Two page project proposal. A committee reviews all applications and announces the new fellow. Osvaldo ...

female-fizzicist.blogspot.com

Female Fizzicist: October 2006

http://female-fizzicist.blogspot.com/2006_10_01_archive.html

A female physics graduate enroute to earning a PhD degree in biophysics (see csb.stanford.edu/ adelene/). She's passionate about science and education, and would like to integrate both. Loves reading (these days wastes away more in front of the TV), and ocassionally posts information based on what she finds in the world out there. Saturday, October 14, 2006. Or you can download here. If that link does work (I have problems accessing it). You can easily find tools to help you out at PyMolWiki. Oh dear, en...

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pymol.org

PyMOL | www.pymol.org

A molecular visualization system on. And distributed by Schrödinger. Geometry: VRML, OBJ, . May 4, 2015:. PyMOL v1.7.6 is available for licensed users. Review the release notes. And download the binaries. December 3, 2014:. PyMOL v1.7.4 is available for licensed users. Review the release notes. And download the binaries. September 4, 2014:. Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship. Deadline November 1st, 2014. Read more. August 4, 2014:. And download the binaries.

pymol11270.skyrock.com

Blog de pymol11270 - Blog de pymol11270 - Skyrock.com

Mot de passe :. J'ai oublié mon mot de passe. Mise à jour :. Abonne-toi à mon blog! Petit voyage au salon de l'agriculture. Voila, vous allez voir la bande de fife de ma classe! Comme on es tous du milieu agricole on a décider d'aller faire un tour au salon de l'agriculture! Attention les paysans du sud a la capitale! Que de rigolade avec vous, que de bon moment ki resterons graver dans ma tete! Super bonne ambiance surtout avec les commerciaux! Me tarde dans deux ans k lon se reffasse sa! Avec toi je pa...

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pymolry.livejournal.com

pymolry

ФНС России и Росфинмониторинг подписали Соглашение о межведомственном сотрудничестве. Oct 22nd, 2015 at 7:16 AM. ФНС и Росфинмониторинг на совместном заседании коллегий определили основные задачи сотрудничества на 2016 год. На совместном заседании коллегий Федеральной. Налоговой службы и Федеральной службы по финансовому мониторингу состоялось подписание нового Соглашения. Глава Федеральной. Налоговой службы России Михаил Мишустин и директор Росфинмониторинга Юрий Чиханчин. Объединение усилий, взаимный о...

pymolwiki.org

PyMOLWiki

Welcome to the PyMOL Wiki! The community-run support site for the PyMOL. New accounts: email jason (dot) vertrees (@) gmail dot com. PyMOL, AxPyMOL, and JyMOL v1.7.4 have all been released. On December 3, 2014. Is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL. Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http:/ pymol.org/fellowship. PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released. On August 4, 2014.

pymomc.com

Pymatuning Outboard Motor Club - Home

Pymatuning Outboard Motor Club. Pymatuning Outboard Motor Club. The lake is getting very high and everyone needs to check their boats. Especially those on G dock. You may have to adjust your ropes. Docks Available" for information please contact Nancy Fisher at (440)293-8313. The fees can be seen on our membership form. 2014 Fishing Contest Winners. Dock and Mooring Info. Pymatuning Outboard Motor Club. 1902 West Lake Road. Jamestown, PA 16134. Like us on Facebook.

pymomo.de

Welcome to PyMOMO — PyMOMO

Only in current section. PyMOMO is a version of the MOMO force field for the "Molecular Modelling Toolkit" by Konrad Hinsen (see http:/ sourcesup.cru.fr/projects/mmtk/. PyMOMO is a library for the Python programming language. I created the software for my doctoral thesis, which deals with automatic force field parameterization.

pymoms.wordpress.com

PYChef | Young, ambitious and a cook? Yes we are! Meet, great and find information from a knowledgable staff about being the best chef you can be.

Young, ambitious and a cook? Meet, great and find information from a knowledgable staff about being the best chef you can be. August 5, 2015. Yes I know it’s been forever! I missed you all so much! I am much different now you all, I have a handsome son Caidyn that takes up a lot […]. Read Article →. Buttermilk – Vanilla Glazed Cronut. June 9, 2014. Read Article →. Homemade Nutella ( Hazelnut Spread). June 9, 2014. Read Article →. April 30, 2014. Read Article →. Bacon, Onion, &Gruyere Quiche. For the Choc...

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pymon.com - This website is for sale! - pymon Resources and Information.

The domain pymon.com. May be for sale by its owner! This page provided to the domain owner free. By Sedo's Domain Parking. Disclaimer: Domain owner and Sedo maintain no relationship with third party advertisers. Reference to any specific service or trade mark is not controlled by Sedo or domain owner and does not constitute or imply its association, endorsement or recommendation.

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