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Dr Louis du Plessis. Research in evolutionary biology and infectious disease carried out by Oliver Pybus. And colleagues at the Department of Zoology. Looking for past group members?

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Home | evolve.zoo.ox.ac.uk Reviews
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Dr Louis du Plessis. Research in evolutionary biology and infectious disease carried out by Oliver Pybus. And colleagues at the Department of Zoology. Looking for past group members?
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1 prof oliver pybus
2 dr kris parag
3 dr marina escalera
4 sarah hill
5 dr nuno faria
6 dr julien thézé
7 university of oxford
8 researchers
9 dphil students
10 evolve zoo
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prof oliver pybus,dr kris parag,dr marina escalera,sarah hill,dr nuno faria,dr julien thézé,university of oxford,researchers,dphil students,evolve zoo,tetyana vasylyeva,research associates,dr moritz kraemer,dr tommy lam,bernardo gutiérrez
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Home | evolve.zoo.ox.ac.uk Reviews

https://evolve.zoo.ox.ac.uk

Dr Louis du Plessis. Research in evolutionary biology and infectious disease carried out by Oliver Pybus. And colleagues at the Department of Zoology. Looking for past group members?

INTERNAL PAGES

evolve.zoo.ox.ac.uk evolve.zoo.ox.ac.uk
1

Tommy Lam

http://evolve.zoo.ox.ac.uk/Evolve/Tommy_Lam.html

Liu W, Fan H, Raghwani J, Lam TT. Li J, Pybus OG, Yao HW, Wo Y, Liu K, An XP, Pei GQ, Li H, Wang HY, Zhao JJ, Jiang T, Ma MJ, Xia X, Dong YD, Zhao TY, Jiang JF, Yang YH, Guan Y, Tong Y, Cao WC (2014) Occurrence and reassortment of avian influenza A (H7N9) viruses derived from coinfected birds in China. Journal of Virology. Bhatt S, Lam TT. Cotton M, Lam TT. Feng Y, He X, Hsi JH, Li F, Li X, Wang Q, Ruan Y, Xing H, Lam TT. Pybus OG, Takebe Y, Shao Y (2013) The rapidly-expanding CRF01 AE epidemic in China ...

2

Oliver Pybus

http://evolve.zoo.ox.ac.uk/Evolve/Oliver_Pybus.html

Professor of Evolution and Infectious Disease. Oxford, OX1 3PS, UK. I investigate the evolutionary and ecological dynamics of infectious diseases, particularly human pathogenic RNA viruses. I also develop new methods of genetic analysis based on phylogenetic, phylodynamic and population genetic theory. More broadly, I am interested in topics at the interface between ecology and evolution. I am a Professorial Fellow of New College. I am a Chief Editor of the open access journal Virus Evolution. Lu J, Fang...

3

Sarah Hill

http://evolve.zoo.ox.ac.uk/Evolve/Sarah_Hill.html

Oxford, OX1 3PS, UK. I am interested in the epidemiology and ecology of viruses in natural populations. My research involves developing and applying techniques to integrate virus genetic data with traditional clinical and demographic data. I study a variety of systems, including (i) the dynamics of viruses in wild swans, especially avian influenza, (ii) HCV transmission within social networks and (iii) the evolution and diversity of small DNA viruses in badger populations. Tamang R, Chaubey G, Goto R, Ho...

4

Jing Lu

http://evolve.zoo.ox.ac.uk/Evolve/Jing_Lu.html

China Scholarship Council Researcher. Oxford, OX1 3PS, UK. My research centers on the evolutionary and epidemiological investigation of emerging viruses and on virus-host interactions. My current research involves the genetic evolution of novel H7N9 avian influenza viruses and enteroviruses that cause hand foot and mouth diseases. I am also working on other human viruses including norovirus, poliovirus and measles virus. Zeng H*, Lu J*. Wu J, Zeng XQ, Guan DW, Zou LR, Yi LN, Liang LJ, Ni HZ, Kang M, Zhan...

5

Kris Parag

http://evolve.zoo.ox.ac.uk/Evolve/Kris_Parag.html

Oxford, OX1 3PS, UK. My research lies at the intersection of stochastic theory and computational phylogenetics and will focus on the modelling of molecular evolutionary and phylodynamic processes. Vinnicombe G (2013) Single Event Molecular Signalling for Estimation and Control. European Control Conference. Vinnicombe G (2013) Event Triggered Signalling Codecs for Molecular Estimation. 52nd Conference on Decision and Control.

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bioafrica.net bioafrica.net

BioAfrica - HIV-1 & 2 Subtyping Tool Web Interface

http://www.bioafrica.net/rega-genotype/html/subtypinghiv.html

REGA HIV-1 and 2 Automated Subtyping Tool (Version 2.0). This tool is designed to use phylogenetic methods in order to identify the subtype of a specific sequence. The sequence is analysed for recombination using bootscanning methods. Note for batch analysis. The REGA subtype tool accepts up to 1000 sequences at a time. Enter here your input data as FASTA format. Choose a mirror to subtype your sequences. Choose another virus to genotype. UKZN, South Africa,. The Evolutionary Biology Group.

newbioafrica.mrc.ac.za newbioafrica.mrc.ac.za

BioAfrica - Viruses Genotyping Tools

http://newbioafrica.mrc.ac.za/rega-genotype/html/index.html

Click in one of the virus on the tree to subtype your sequences. REGA HIV-1 Subtyping Tool. REGA HIV-2 Subtyping Tool. Dengue, Zika and Chikungunya Subtyping Tool. Oxford Hepatitis B virus Subtyping Tool. Oxford Hepatitis C virus Subtyping Tool. BioAfrica Human herpesvirus 8 Subtyping Tool. REGA Human papillomavirus Subtyping Tool. About the tools' publications and its developers. The Virus Genotyping Tools are developed in cooperation. UKZN, South Africa. With the Evolutionary Biology Group.

taxonomy.zoology.gla.ac.uk taxonomy.zoology.gla.ac.uk

Page Lab - Links

http://taxonomy.zoology.gla.ac.uk/links.html

Taxonomy, Systematics, and Bioinformatics. At the University of Glasgow. Mary Walsh's fascinating site deals with scientific communication, as well as providing insight into the design of TreeBASE. Gutell lab Comparative RNA Web Site. SSU rRNA Secondary Structure Prediction and Alignment. Oxford University Evolutionary Biology Group. Paul Harvey, Andy Rambaut, Mike Charleston, etc.). Taxonomy, Systematics and Evolution at Imperial College. Andy Purvis, Don Quicke, Alfried Vogler, etc.).

naylorlab.scs.fsu.edu naylorlab.scs.fsu.edu

Naylor Lab - Links

http://naylorlab.scs.fsu.edu/Links.html

ASIH: American Society of Ichthyologists and Herpetologists. AES: American Elasmobranch Society. SSB: Society of Systematics Biologists. WHS: Willi Hennig Society. Journal of Molecular Evolution. Journal of Theorical Biology. Molecular and Developmental Evolution (Journal of Experimental Zoology). Molecular Biology and Evolution. Molecular Phylogenetics and Evolution. Trends in Ecology and Evolution. Molecular Biologist's workbench: JaMBW. Pedro's molecular research tools. Landscape of tree space.

ncbi.nlm.nih.gov ncbi.nlm.nih.gov

Reviving the African Wolf Canis lupus lupaster in North and West Africa: A Mitochondrial Lineage Ranging More than 6,000 km Wide

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3416759

Skip to main content. Sign in to NCBI. US National Library of Medicine. National Institutes of Health. 2012; 7(8): e42740. Published online 2012 Aug 10. Doi: 10.1371/journal.pone.0042740. Reviving the African Wolf. In North and West Africa: A Mitochondrial Lineage Ranging More than 6,000 km Wide. Chabi Adéyèmi Marc Sylvestre Djagoun. Sergios-Orestis Kolokotronis, Editor. UMR BOREA IRD 207, Muséum National d’Histoire Naturelle, Paris, France. SYLVATROP, Nantes, France. This is an open-access article distr...

ve.oxfordjournals.org ve.oxfordjournals.org

The effect of ecosystem biodiversity on virus genetic diversity depends on virus species: A study of chiltepin-infecting begomoviruses in Mexico | Virus Evolution

http://ve.oxfordjournals.org/content/1/1/vev004

Skip to main content. Volume 1, Issue 1. Books and custom publishing. Santiago F. Elena. The effect of ecosystem biodiversity on virus genetic diversity depends on virus species: A study of chiltepin-infecting begomoviruses in Mexico. DOI: http:/ dx.doi.org/10.1093/ve/vev004. First published online: 1 June 2015. Pepper golden mosaic virus. Pepper huasteco yellow vein virus. One of the defining characteristics of viruses is their high capacity to generate genetic diversity ( Holmes 2009. Indeed, around 15...

newbioafrica.mrc.ac.za newbioafrica.mrc.ac.za

BioAfrica - HIV-1 & 2 Subtyping Tool Web Interface

http://newbioafrica.mrc.ac.za/rega-genotype/html/subtypinghiv.html

REGA HIV-1 and 2 Automated Subtyping Tool (Version 2.0). This tool is designed to use phylogenetic methods in order to identify the subtype of a specific sequence. The sequence is analysed for recombination using bootscanning methods. Note for batch analysis. The REGA subtype tool accepts up to 1000 sequences at a time. Enter here your input data as FASTA format. Choose a mirror to subtype your sequences. Choose another virus to genotype. UKZN, South Africa,. The Evolutionary Biology Group.

newbioafrica.mrc.ac.za newbioafrica.mrc.ac.za

BioAfrica - Oxford HBV Subtyping Tool Web Interface

http://newbioafrica.mrc.ac.za/rega-genotype/html/subtypinghbv.html

Oxford HBV Automated Subtyping Tool. This tool is designed to use phylogenetic methods in order to identify the subtype of a specific sequence. The sequence is analysed for recombination using bootscanning methods. Note for batch analysis. The Oxford HBV subtype tool accepts up to 1000 sequences at a time. Enter here your input data as FASTA format. Choose a mirror to subtype your sequences. Choose another virus to genotype. UKZN, South Africa,. The Evolutionary Biology Group.

bioafrica.net bioafrica.net

BioAfrica - Oxford HCV Subtyping Tool Web Interface

http://www.bioafrica.net/rega-genotype/html/subtypinghcv.html

Oxford HCV Automated Subtyping Tool (Version 2.0). This tool uses phylogenetic methods to identify the subtype of query sequences. The recombination analysis is done only with HCV Genotypes. A version that uses HCV subtypes in the recombination is available here. Note for batch analysis. The Oxford HCV subtype tool accepts up to 1000 sequences at a time. Enter here your input data as FASTA format. Choose a mirror to subtype your sequences. Choose another virus to genotype. UKZN, South Africa,.

bioafrica.mrc.ac.za bioafrica.mrc.ac.za

BioAfrica - Viruses Genotyping Tools

http://bioafrica.mrc.ac.za/rega-genotype/html/index.html

Click in one of the virus on the tree to subtype your sequences. REGA HIV-1 Subtyping Tool. REGA HIV-2 Subtyping Tool. Dengue, Zika and Chikungunya Subtyping Tool. Oxford Hepatitis B virus Subtyping Tool. Oxford Hepatitis C virus Subtyping Tool. BioAfrica Human herpesvirus 8 Subtyping Tool. REGA Human papillomavirus Subtyping Tool. About the tools' publications and its developers. The Virus Genotyping Tools are developed in cooperation. UKZN, South Africa. With the Evolutionary Biology Group.

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Dr Louis du Plessis. Research in evolutionary biology and infectious disease carried out by Oliver Pybus. And colleagues at the Department of Zoology. Looking for past group members?

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